RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA285816", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA285816 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29947833 29947833 PRJNA285816_S_NODE_1991_length_472_cov_1.893617_g1889_i0 PRJNA285816 1991 472 1.893617 8.93787224 Armatimonadia bacterium 2663015 Bacteria Bacteria 71.6 3.51e-11   NR MEN6545889.1 2663015 g1889 i0 31.7 1.02330508474576 161 85 91.5 5 446 15 55 207 MEN6545889.1 Ig-like domain-containing protein [Armatimonadia bacterium] diamond 483 71.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
32809831 32809831 PRJNA285816_S_NODE_16500_length_193_cov_1.444444_g16398_i0 PRJNA285816 16500 193 1.444444 2.78777692 Bacillati 1783272 Bacteria Bacteria 59.7 2.04e-8   NR HUV04754.1 2033014 g16398 i0 47.1 3.04663212435233 70 26 93.3 3 2 181 482 550 HUV04754.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 588 59.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;