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contig_metadata

8 rows where bioproject = "PRJNA285816", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 8 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 8 ✖

bioproject 1

  • PRJNA285816 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646737 1646737 PRJNA285816_S_NODE_1742_length_500_cov_5.465632_g1640_i0 PRJNA285816 1742 500 5.465632 27.32816 Methanosarcinales archaeon 2250255 Archaea Archaea 225 2.78e-69   NR RYE83110.1 2250255 g1640 i0 70 0.9 150 45 90 0 8 457 267 416 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 450 225 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
13125944 13125944 PRJNA285816_S_NODE_3531_length_360_cov_1.501608_g3429_i0 PRJNA285816 3531 360 1.501608 5.4057888 Halorussus aquaticus 2953748 Archaea Archaea 52.8 0.034   NTclustered gi|2269702782|gb|CP100400.1| 2953748 g3429 i0 100 0.0777777777777778 28 0 8 0 295 322 1465255 1465228 Halorussus aquaticus strain XZYJ18 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus aquaticus
26915935 26915935 PRJNA285816_S_NODE_5002_length_307_cov_2.186047_g4900_i0 PRJNA285816 5002 307 2.186047 6.71116429 Methanocellales archaeon 2666334 Archaea Archaea 47.4 0.0018600000000000001   NR MDI6889065.1 2666334 g4900 i0 43.3 0.586319218241042 60 34 58.6 0 87 266 592 651 MDI6889065.1 DNRLRE domain-containing protein [Methanocellales archaeon] diamond 180 47.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales     Methanocellales archaeon
27769342 27769342 PRJNA285816_S_NODE_12984_length_210_cov_1.937888_g12882_i0 PRJNA285816 12984 210 1.937888 4.0695648 Methanosarcinales archaeon 2250255 Archaea Archaea 42.7 0.0244   NR RYE85335.1 2250255 g12882 i0 40 0.785714285714286 55 19 78.6 1 46 210 307 347 RYE85335.1 MAG: hypothetical protein EOO65_00610 [Methanosarcinales archaeon] diamond 165 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27832189 27832189 PRJNA285816_S_NODE_28664_length_163_cov_0.912281_g28562_i0 PRJNA285816 28664 163 0.912281 1.48701803 Methanosarcinales archaeon 2250255 Archaea Archaea 43.1 0.00719   NR RYE84401.1 2250255 g28562 i0 45.1 0.938650306748466 51 27 92 1 14 163 19 69 RYE84401.1 MAG: hypothetical protein EOO65_02325, partial [Methanosarcinales archaeon] diamond 153 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30250002 30250002 PRJNA285816_S_NODE_17952_length_187_cov_2.978261_g17850_i0 PRJNA285816 17952 187 2.978261 5.56934807 root 1 Root_unresolved Root_unresolved 58.2 6.39e-8   NR OPY44313.1 1811687 g17850 i0 50.8 5.85561497326203 61 29 97.9 1 183 1 11 70 OPY44313.1 MAG: succinyl-CoA synthetase subunit beta [Methanosaeta sp. PtaU1.Bin028] diamond 1095 58.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaU1.Bin028
31450757 31450757 PRJNA285816_S_NODE_22076_length_174_cov_1.248000_g21974_i0 PRJNA285816 22076 174 1.248 2.17152 Stenosarchaea group 2290931 Archaea Archaea 83.2 7.58e-17   NR HEX7444945.1 90426 g21974 i0 65.5 14.948275862069 58 20 100 0 1 174 396 453 HEX7444945.1 ATP citrate lyase citrate-binding domain-containing protein [Methanothrix sp.] diamond 2601 83.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
31780765 31780765 PRJNA285816_S_NODE_17817_length_188_cov_1.122302_g17715_i0 PRJNA285816 17817 188 1.122302 2.10992776 Methanolinea sp. 2268143 Archaea Archaea 50.4 2.37e-5   NR MBP7120145.1 2268143 g17715 i0 47.1 0.813829787234043 51 27 81.4 0 181 29 38 88 MBP7120145.1 hypothetical protein [Methanolinea sp.] diamond 153 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanolinea Methanolinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;