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contig_metadata

9 rows where bioproject = "PRJNA285816", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA285816 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19498094 19498094 PRJNA285816_S_NODE_9476_length_235_cov_2.236559_g9374_i0 PRJNA285816 9476 235 2.236559 5.25591365 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 5.17e-25   NR ETO07522.1 46433 g9374 i0 61.5 4.96595744680851 78 30 99.6 0 1 234 243 320 ETO07522.1 aminotransferase, classes I and II family protein [Reticulomyxa filosa] diamond 1167 107 0.990654205607477 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28986836 28986836 PRJNA285816_S_NODE_29148_length_162_cov_1.380531_g29046_i0 PRJNA285816 29148 162 1.380531 2.23646022 root 1 Root_unresolved Root_unresolved 51.2 1.27e-5   NR ETO08983.1 46433 g29046 i0 47.8 1.7037037037037 46 24 85.2 0 4 141 245 290 ETO08983.1 NADH-ubiquinone oxidoreductase subunit, mitochondrial precursor, partial [Reticulomyxa filosa] diamond 276 51.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29252814 29252814 PRJNA285816_S_NODE_11049_length_223_cov_0.896552_g10947_i0 PRJNA285816 11049 223 0.896552 1.99931096 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 66.2 5.34e-11   NR ETO00580.1 46433 g10947 i0 46.2 1.04932735426009 78 35 98.2 2 4 222 128 203 ETO00580.1 hypothetical protein RFI_36860 [Reticulomyxa filosa] diamond 234 66.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29284447 29284447 PRJNA285816_S_NODE_11549_length_219_cov_1.217647_g11447_i0 PRJNA285816 11549 219 1.217647 2.66664693 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 70.5 4.52e-12   NR ETO22086.1 46433 g11447 i0 47.9 1.94520547945205 71 36 97.3 1 217 5 815 884 ETO22086.1 protein serine/threonine phosphatase, partial [Reticulomyxa filosa] diamond 426 70.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29428345 29428345 PRJNA285816_S_NODE_12209_length_215_cov_1.048193_g12107_i0 PRJNA285816 12209 215 1.048193 2.25361495 root 1 Root_unresolved Root_unresolved 109 7.61e-26   NR ETO16168.1 46433 g12107 i0 76.1 9.72558139534884 67 16 93.5 0 209 9 339 405 ETO16168.1 hypothetical protein RFI_21190, partial [Reticulomyxa filosa] diamond 2091 109 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30516448 30516448 PRJNA285816_S_NODE_19833_length_181_cov_1.181818_g19731_i0 PRJNA285816 19833 181 1.181818 2.13909058 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 70.9 1.91e-12   NR ETO12503.1 46433 g19731 i0 62.1 0.961325966850829 58 21 96.1 1 176 3 893 949 ETO12503.1 hypothetical protein RFI_24873, partial [Reticulomyxa filosa] diamond 174 70.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30913423 30913423 PRJNA285816_S_NODE_23134_length_171_cov_1.278689_g23032_i0 PRJNA285816 23134 171 1.278689 2.18655819 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 57.4 9.81e-8   NR ETO19462.1 46433 g23032 i0 50 4.7719298245614 54 26 94.7 1 162 1 259 311 ETO19462.1 hypothetical protein RFI_17769 [Reticulomyxa filosa] diamond 816 57.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31844041 31844041 PRJNA285816_S_NODE_20937_length_177_cov_1.828125_g20835_i0 PRJNA285816 20937 177 1.828125 3.23578125 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 116 1.71e-30   NR ETO19396.1 46433 g20835 i0 84.7 3.98305084745763 59 9 100 0 1 177 149 207 ETO19396.1 acetyl-coenzyme a synthetase, partial [Reticulomyxa filosa] diamond 705 116 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32715413 32715413 PRJNA285816_S_NODE_8960_length_241_cov_0.979167_g8858_i0 PRJNA285816 8960 241 0.979167 2.35979247 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 108 2.54e-25   NR ETO05095.1 46433 g8858 i0 69.6 22.5311203319502 79 24 98.3 0 1 237 222 300 ETO05095.1 hypothetical protein RFI_32303 [Reticulomyxa filosa] diamond 5430 109 0.990825688073395 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;