RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA285816", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA285816 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27263925 27263925 PRJNA285816_S_NODE_7843_length_254_cov_1.619512_g7741_i0 PRJNA285816 7843 254 1.619512 4.11356048 Lentisphaeraceae bacterium 2461380 Bacteria Bacteria 50.1 1.1e-4   NR NQZ57406.1 2461380 g7741 i0 37.9 0.68503937007874 58 35 67.3 1 5 175 224 281 NQZ57406.1 hypothetical protein [Lentisphaeraceae bacterium] diamond 174 50.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae   Lentisphaeraceae bacterium
31559686 31559686 PRJNA285816_S_NODE_11176_length_222_cov_0.901734_g11074_i0 PRJNA285816 11176 222 0.901734 2.00184948 Lentisphaerota bacterium 1932692 Bacteria Bacteria 42.4 0.0376   NR NLN03199.1 1932692 g11074 i0 46.3 0.554054054054054 41 18 55.4 1 11 133 130 166 NLN03199.1 IS110 family transposase [Lentisphaerota bacterium] diamond 123 42.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;