RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA285816", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA285816 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29158547 29158547 PRJNA285816_S_NODE_23509_length_170_cov_1.289256_g23407_i0 PRJNA285816 23509 170 1.289256 2.1917352 Fidelibacterota bacterium 2026760 Bacteria Bacteria 48.1 1.73e-4   NR MAM98301.1 2026760 g23407 i0 40.4 0.829411764705882 47 28 82.9 0 167 27 409 455 MAM98301.1 hypothetical protein [Fidelibacterota bacterium] diamond 141 48.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30453517 30453517 PRJNA285816_S_NODE_13773_length_206_cov_1.324841_g13671_i0 PRJNA285816 13773 206 1.324841 2.72917246 Fidelibacterota bacterium 2026760 Bacteria Bacteria 96.3 1.52e-21   NR MFQ6616369.1 2026760 g13671 i0 67.2 0.932038834951456 64 21 93.2 0 13 204 26 89 MFQ6616369.1 pyridoxal phosphate-dependent aminotransferase [Fidelibacterota bacterium] diamond 192 96.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;