RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA285816", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA285816 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28653233 28653233 PRJNA285816_S_NODE_2967_length_389_cov_1.161765_g2865_i0 PRJNA285816 2967 389 1.161765 4.51926585 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47 0.0015   NR MFP6597731.1 2030809 g2865 i0 44.4 0.416452442159383 54 29 40.9 1 26 184 61 114 MFP6597731.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 162 47 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28779322 28779322 PRJNA285816_S_NODE_19727_length_181_cov_1.893939_g19625_i0 PRJNA285816 19727 181 1.893939 3.42802959 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 70.9 1.88e-12   NR PCJ54638.1 2030809 g19625 i0 53.6 2.70165745856354 56 26 92.8 0 170 3 36 91 PCJ54638.1 MAG: hypothetical protein COA73_14280 [Candidatus Hydrogenedentota bacterium] diamond 489 70.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;