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contig_metadata

27 rows where bioproject = "PRJNA283169", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 27 ✖

tax_phylum 1

  • Myxococcota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJNA283169 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646554 1646554 PRJNA283169_P_NODE_242_length_852_cov_2.046077_g194_i0 PRJNA283169 242 852 2.046077 17.43257604 Sandaracinus amylolyticus 927083 Bacteria Bacteria 712 0   NTclustered gi|816953346|gb|CP011125.1| 927083 g194 i0 89.1 247.708920187793 578 55 68 7 1 576 8616734 8617305 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 211048 712 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
1646556 1646556 PRJNA283169_P_NODE_2662_length_253_cov_1.382353_g2599_i0 PRJNA283169 2662 253 1.382353 3.49735309 uncultured myxobacterium HF0200_01L06 723556 Bacteria Bacteria 165 2.83e-36   NTclustered gi|297170971|gb|GU567972.1| 723556 g2599 i0 84.211 25.0790513833992 171 25 67 2 3 172 30342 30511 Uncultured myxobacterium HF0200_01L06 genomic sequence blastn 6345 165 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     uncultured myxobacterium HF0200_01L06
1646572 1646572 PRJNA283169_P_NODE_4122_length_207_cov_0.835443_g4059_i0 PRJNA283169 4122 207 0.835443 1.72936701 uncultured Myxococcales bacterium 253830 Bacteria Bacteria 191 3.68e-44   NTclustered gi|219811788|gb|FJ552002.1| 253830 g4059 i0 95.763 103.415458937198 118 5 57 0 75 192 986 869 Uncultured Myxococcales bacterium clone LTSP_BACT_P5A15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 21407 191 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     uncultured Myxococcales bacterium
2922430 2922430 PRJNA283169_P_NODE_4543_length_198_cov_1.577181_g4480_i0 PRJNA283169 4543 198 1.577181 3.12281838 Sandaracinus amylolyticus 927083 Bacteria Bacteria 226 9.56e-55   NTclustered gi|816953346|gb|CP011125.1| 927083 g4480 i0 87.755 30.8434343434343 196 21 98 3 4 198 8617334 8617141 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 6107 226 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
5475160 5475160 PRJNA283169_P_NODE_3325_length_227_cov_1.910112_g3262_i0 PRJNA283169 3325 227 1.910112 4.33595424 Sandaracinus amylolyticus 927083 Bacteria Bacteria 309 1.0900000000000002e-79   NTclustered gi|816953346|gb|CP011125.1| 927083 g3262 i0 92.925 149.674008810573 212 15 93 0 1 212 8616102 8616313 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 33976 309 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
5475163 5475163 PRJNA283169_P_NODE_3425_length_224_cov_1.297143_g3362_i0 PRJNA283169 3425 224 1.297143 2.90560032 Labilithrix luteola 1391654 Bacteria Bacteria 300 6.44e-77   NTclustered gi|913610804|gb|CP012333.1| 1391654 g3362 i0 92.381 168.107142857143 210 16 94 0 3 212 3943084 3943293 Labilithrix luteola strain DSM 27648, complete genome blastn 37656 300 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
5475191 5475191 PRJNA283169_P_NODE_5825_length_177_cov_1.625000_g5762_i0 PRJNA283169 5825 177 1.625 2.87625 Sandaracinus amylolyticus 927083 Bacteria Bacteria 252 1.3699999999999999e-62   NTclustered gi|816953346|gb|CP011125.1| 927083 g5762 i0 92.571 134.446327683616 175 13 99 0 1 175 8616602 8616776 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 23797 252 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
6749463 6749463 PRJNA283169_P_NODE_406_length_615_cov_3.174912_g349_i0 PRJNA283169 406 615 3.174912 19.5257088 Labilithrix luteola 1391654 Bacteria Bacteria 968 0   NTclustered gi|913610804|gb|CP012333.1| 1391654 g349 i0 95 153.372357723577 620 25 100 5 1 615 3942903 3942285 Labilithrix luteola strain DSM 27648, complete genome blastn 94324 968 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
6749485 6749485 PRJNA283169_P_NODE_5926_length_176_cov_1.188976_g5863_i0 PRJNA283169 5926 176 1.188976 2.09259776 Sandaracinus amylolyticus 927083 Bacteria Bacteria 137 3.98e-28   NTclustered gi|816953346|gb|CP011125.1| 927083 g5863 i0 82.286 43.2613636363636 175 16 98 12 4 176 8617443 8617282 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 7614 137 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
8025051 8025051 PRJNA283169_P_NODE_4207_length_205_cov_1.224359_g4144_i0 PRJNA283169 4207 205 1.224359 2.50993595 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 196 7.819999999999999e-46   NTclustered gi|1950807334|gb|CP066680.1| 2026735 g4144 i0 85.567 2.04390243902439 194 20 93 8 16 205 309485 309296 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_69_Ag_B-0.1um_32_21 chromosome blastn 419 196 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
11262186 11262186 PRJNA283169_P_NODE_7189_length_165_cov_1.284483_g7126_i0 PRJNA283169 7189 165 1.284483 2.11939695 Haliangium 162027 Bacteria Bacteria 244 2.12e-60   NTclustered gi|470485361|ref|NR_076697.1| 80816 g7126 i0 96 219.793939393939 150 6 91 0 16 165 1499 1350 Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence blastn 36266 244 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium ochraceum
15086609 15086609 PRJNA283169_P_NODE_612_length_489_cov_2.259091_g550_i0 PRJNA283169 612 489 2.259091 11.04695499 Pendulispora 3375062 Bacteria Bacteria 514 5.06e-141   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g550 i0 91.87 133.128834355828 369 29 75 1 122 489 7288809 7289177 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 65100 514 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
16949187 16949187 PRJNA283169_P_NODE_974_length_394_cov_2.359420_g912_i0 PRJNA283169 974 394 2.35942 9.2961148 Pendulispora rubella 2741070 Bacteria Bacteria 625 1.7699999999999996e-174   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g912 i0 95.226 180.720812182741 398 14 100 5 1 394 7289142 7289538 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 71204 625 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
17636617 17636617 PRJNA283169_P_NODE_114_length_1185_cov_4.173415_g80_i0 PRJNA283169 114 1185 4.173415 49.45496775 Myxococcia 32015 Bacteria Bacteria 549 3.5199999999999984e-151   NTclustered gi|913610804|gb|CP012333.1| 1391654 g80 i0 81.602 223.236286919831 674 115 97 9 502 1170 3941757 3942426 Labilithrix luteola strain DSM 27648, complete genome blastn 264535 553 0.992766726943942 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
22048263 22048263 PRJNA283169_P_NODE_458_length_570_cov_3.019194_g401_i0 PRJNA283169 458 570 3.019194 17.2094058 Pendulispora brunnea 2905690 Bacteria Bacteria 774 0   NTclustered gi|2698055994|gb|CP089982.1| 2905690 g401 i0 91.259 127.691228070175 572 44 100 6 1 570 7408663 7408096 Pendulispora brunnea strain MSr12523 chromosome, complete genome blastn 72784 774 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
22735816 22735816 PRJNA283169_P_NODE_3418_length_224_cov_2.291429_g3355_i0 PRJNA283169 3418 224 2.291429 5.13280096 Polyangiales 3031712 Bacteria Bacteria 381 2.2299999999999993e-101   NTclustered gi|1127353251|gb|CP016211.1| 888845 g3355 i0 97.321 184.785714285714 224 6 100 0 1 224 771158 771381 Minicystis rosea strain DSM 24000 chromosome, complete genome blastn 41392 381 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
23323825 23323825 PRJNA283169_P_NODE_4879_length_193_cov_1.020833_g4816_i0 PRJNA283169 4879 193 1.020833 1.97020769 Sandaracinus amylolyticus 927083 Bacteria Bacteria 158 3.43e-34   NTclustered gi|816953346|gb|CP011125.1| 927083 g4816 i0 83.523 526.870466321243 176 22 90 7 13 185 8617591 8617420 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 101686 158 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
24597867 24597867 PRJNA283169_P_NODE_2600_length_256_cov_1.000000_g2537_i0 PRJNA283169 2600 256 1 2.56 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 148 3.78e-39   NR MBN8536102.1 2026735 g2537 i0 85.5 0.97265625 83 12 97.3 0 3 251 950 1032 MBN8536102.1 DNA-directed RNA polymerase subunit beta' [Deltaproteobacteria bacterium] diamond 249 148 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26725525 26725525 PRJNA283169_S_NODE_3501_length_161_cov_0.080357_g3487_i0 PRJNA283169 3501 161 0.080357 0.12937477 Archangium sp. Cb G35 1920190 Bacteria Bacteria 48.5 1.12e-4   NR WP_073561069.1 1920190 g3487 i0 54.7 0.987577639751553 53 24 98.8 0 1 159 1602 1654 WP_073561069.1 Ig-like domain-containing protein [Archangium sp. Cb G35] diamond 159 48.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp. Cb G35
27168735 27168735 PRJNA283169_P_NODE_902_length_409_cov_1.280556_g840_i0 PRJNA283169 902 409 1.280556 5.23747404 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 121 8.979999999999998e-31   NR MBI3544264.1 2026735 g840 i0 54 1.00488997555012 137 50 99.8 3 1 408 77 201 MBI3544264.1 50S ribosomal protein L15 [Deltaproteobacteria bacterium] diamond 411 121 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27895261 27895261 PRJNA283169_P_NODE_1985_length_290_cov_0.975104_g1923_i0 PRJNA283169 1985 290 0.975104 2.8278016 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 143 3.48e-40   NR MBI5603935.1 2026735 g1923 i0 69.2 0.941379310344828 91 27 94.1 1 3 275 20 109 MBI5603935.1 nucleotidyltransferase domain-containing protein [Deltaproteobacteria bacterium] diamond 273 143 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27990210 27990210 PRJNA283169_S_NODE_2585_length_179_cov_0.146154_g2571_i0 PRJNA283169 2585 179 0.146154 0.26161566000000003 Polyangiales bacterium 3034171 Bacteria Bacteria 54.7 9.57e-7   NR MFI5296679.1 3034171 g2571 i0 37.9 0.972067039106145 58 36 97.2 0 6 179 358 415 MFI5296679.1 DNA polymerase [Polyangiales bacterium] diamond 174 54.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28590189 28590189 PRJNA283169_P_NODE_6927_length_166_cov_1.333333_g6864_i0 PRJNA283169 6927 166 1.333333 2.21333278 Archangium sp. 1872627 Bacteria Bacteria 44.3 0.00373   NR MFT3706953.1 1872627 g6864 i0 70.4 0.957831325301205 27 8 48.8 0 1 81 261 287 MFT3706953.1 ABC transporter ATP-binding protein [Archangium sp.] diamond 159 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
28810654 28810654 PRJNA283169_P_NODE_728_length_450_cov_1.613466_g666_i0 PRJNA283169 728 450 1.613466 7.260597 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.00677   NR MBW2126311.1 2026735 g666 i0 47.2 0.24 36 19 24 0 241 134 4 39 MBW2126311.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 108 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29270545 29270545 PRJNA283169_P_NODE_3089_length_236_cov_1.112299_g3026_i0 PRJNA283169 3089 236 1.112299 2.62502564 Myxococcia 32015 Bacteria Bacteria 55.8 6.94e-7   NR MBK6463597.1 2026763 g3026 i0 49 1.16949152542373 49 25 62.3 0 150 4 177 225 MBK6463597.1 hypothetical protein [Myxococcales bacterium] diamond 276 55.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30769308 30769308 PRJNA283169_P_NODE_6674_length_168_cov_0.865546_g6611_i0 PRJNA283169 6674 168 0.865546 1.45411728 Polyangiales bacterium 3034171 Bacteria Bacteria 53.9 1.57e-6   NR HEX7477171.1 3034171 g6611 i0 50.9 0.982142857142857 55 24 98.2 2 168 4 499 550 HEX7477171.1 right-handed parallel beta-helix repeat-containing protein [Polyangiales bacterium] diamond 165 53.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
31401544 31401544 PRJNA283169_P_NODE_6776_length_167_cov_0.881356_g6713_i0 PRJNA283169 6776 167 0.881356 1.47186452 Archangiaceae bacterium 2684409 Bacteria Bacteria 48.9 8.9e-5   NR MBK7864325.1 2684409 g6713 i0 55.8 1.72455089820359 43 19 77.2 0 1 129 368 410 MBK7864325.1 hypothetical protein [Archangiaceae bacterium] diamond 288 48.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae   Archangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;