RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA283169" and tax_phylum = "Candidatus Roizmaniibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA283169 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10575740 10575740 PRJNA283169_P_NODE_5669_length_180_cov_1.106870_g5606_i0 PRJNA283169 5669 180 1.10687 1.992366 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 270 3.87e-68   NTclustered gi|1958015594|gb|CP064967.1| 2282149 g5606 i0 94.35 1.22777777777778 177 8 100 2 1 176 911893 912068 MAG: Candidatus Roizmanbacteria bacterium isolate Damh_18-Q3-R51-60_BAT3C.63_uni chromosome, complete genome blastn 221 270 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
29379345 29379345 PRJNA283169_P_NODE_1449_length_332_cov_1.346290_g1387_i0 PRJNA283169 1449 332 1.34629 4.4696828 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 139 2.19e-38   NR MBI5122723.1 2282149 g1387 i0 81 0.713855421686747 79 15 71.4 0 239 3 1 79 MBI5122723.1 TatD family hydrolase [Candidatus Roizmanbacteria bacterium] diamond 237 139 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31306381 31306381 PRJNA283169_P_NODE_6695_length_167_cov_1.322034_g6632_i0 PRJNA283169 6695 167 1.322034 2.20779678 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 84.3 2.63e-19   NR MBI3366507.1 2282149 g6632 i0 86.3 0.916167664670659 51 7 91.6 0 166 14 70 120 MBI3366507.1 50S ribosomal protein L18 [Candidatus Roizmanbacteria bacterium] diamond 153 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;