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contig_metadata

17 rows where bioproject = "PRJNA283169", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 17 ✖

tax_kingdom 1

  • Pseudomonadati · 17 ✖

bioproject 1

  • PRJNA283169 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15674489 15674489 PRJNA283169_P_NODE_4193_length_205_cov_1.333333_g4130_i0 PRJNA283169 4193 205 1.333333 2.73333265 Bdellovibrio 958 Bacteria Bacteria 104 4.51e-25   NR MEN0057906.1 28201 g4130 i0 75 5.95609756097561 68 17 99.5 0 1 204 162 229 MEN0057906.1 acyl-CoA dehydrogenase family protein [Bdellovibrio sp.] diamond 1221 105 0.990476190476191 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
23323822 23323822 PRJNA283169_P_NODE_4779_length_194_cov_1.427586_g4716_i0 PRJNA283169 4779 194 1.427586 2.76951684 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 291 3.2599999999999993e-74   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g4716 i0 93.814 225.046391752577 194 11 100 1 1 194 3447798 3447990 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 43659 291 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
23323831 23323831 PRJNA283169_P_NODE_5399_length_184_cov_1.133333_g5336_i0 PRJNA283169 5399 184 1.133333 2.08533272 Bdellovibrio sp. NC01 2220073 Bacteria Bacteria 268 1.43e-67   NTclustered gi|1700686220|gb|CP030034.1| 2220073 g5336 i0 93.085 2.43478260869565 188 5 100 4 1 184 215160 214977 Bdellovibrio sp. NC01 chromosome, complete genome blastn 448 268 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. NC01
26598976 26598976 PRJNA283169_P_NODE_4601_length_198_cov_0.879195_g4538_i0 PRJNA283169 4601 198 0.879195 1.7408061 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 68.9 5.52e-12   NR MEK7355206.1 3034175 g4538 i0 50.8 2.68181818181818 59 29 89.4 0 177 1 179 237 MEK7355206.1 FliH/SctL family protein [Bdellovibrionota bacterium] diamond 531 68.9 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
26902125 26902125 PRJNA283169_P_NODE_7101_length_166_cov_0.871795_g7038_i0 PRJNA283169 7101 166 0.871795 1.4471797 Bdellovibrio 958 Bacteria Bacteria 112 2.76e-28   NR WP_374076269.1 958 g7038 i0 89.1 3.97590361445783 55 6 99.4 0 166 2 284 338 WP_374076269.1 MULTISPECIES: hypothetical protein [Bdellovibrio] diamond 660 113 0.991150442477876 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio  
27863709 27863709 PRJNA283169_P_NODE_2685_length_252_cov_1.773399_g2622_i0 PRJNA283169 2685 252 1.773399 4.46896548 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 57.4 2.74e-7   NR MES3036618.1 3034175 g2622 i0 46 0.595238095238095 50 27 59.5 0 239 90 7 56 MES3036618.1 alpha/beta fold hydrolase [Bdellovibrionota bacterium] diamond 150 57.4 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
28021832 28021832 PRJNA283169_P_NODE_1065_length_382_cov_1.408408_g1003_i0 PRJNA283169 1065 382 1.408408 5.38011856 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 72.8 5.16e-12   NR MBK7961858.1 2053517 g1003 i0 60 0.549738219895288 70 28 55 0 298 89 210 279 MBK7961858.1 hypothetical protein [Bdellovibrionales bacterium] diamond 210 72.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28337439 28337439 PRJNA283169_S_NODE_2366_length_186_cov_0.109489_g2352_i0 PRJNA283169 2366 186 0.109489 0.20364954 Oligoflexia bacterium 2599941 Bacteria Bacteria 66.6 6.38e-11   NR MBK9293443.1 2599941 g2352 i0 77.8 0.580645161290323 36 8 58.1 0 118 11 361 396 MBK9293443.1 Ppx/GppA family phosphatase [Oligoflexia bacterium] diamond 108 66.6 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
29000835 29000835 PRJNA283169_P_NODE_7468_length_164_cov_1.252174_g7405_i0 PRJNA283169 7468 164 1.252174 2.05356536 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 68.9 8.06e-14   NR MCM2349523.1 2081706 g7405 i0 80.9 0.859756097560976 47 9 86 0 1 141 21 67 MCM2349523.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 141 68.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29252810 29252810 PRJNA283169_S_NODE_1109_length_253_cov_1.990196_g1095_i0 PRJNA283169 1109 253 1.990196 5.03519588 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 144 2.49e-41   NR MBX9767865.1 2053517 g1095 i0 90.8 0.901185770750988 76 7 90.1 0 230 3 1 76 MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] diamond 228 144 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29252812 29252812 PRJNA283169_S_NODE_2769_length_174_cov_0.112000_g2755_i0 PRJNA283169 2769 174 0.112 0.19488 Micavibrio sp. 2024841 Bacteria Bacteria 59.7 1.52e-8   NR MDB5491835.1 2024841 g2755 i0 47.4 0.982758620689655 57 30 98.3 0 172 2 1169 1225 MDB5491835.1 TonB-dependent receptor [Micavibrio sp.] diamond 171 59.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
30611109 30611109 PRJNA283169_P_NODE_6793_length_167_cov_0.881356_g6730_i0 PRJNA283169 6793 167 0.881356 1.47186452 Bacteriovorax sp. 2608087 Bacteria Bacteria 97.8 7.42e-23   NR MDD4976358.1 2608087 g6730 i0 78.2 0.988023952095808 55 12 98.8 0 165 1 218 272 MDD4976358.1 radical SAM protein [Bacteriovorax sp.] diamond 165 97.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.
30705917 30705917 PRJNA283169_S_NODE_2194_length_192_cov_0.216783_g2180_i0 PRJNA283169 2194 192 0.216783 0.41622336 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 45.1 8.71e-4   NR MBX3017963.1 2026715 g2180 i0 63.6 0.515625 33 8 51.6 1 93 191 1 29 MBX3017963.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 99 45.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
30800692 30800692 PRJNA283169_P_NODE_4814_length_194_cov_0.979310_g4751_i0 PRJNA283169 4814 194 0.97931 1.8998614 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 57 1.84e-7   NR MDZ4082971.1 2053517 g4751 i0 42.3 1.0979381443299 71 33 97.4 3 3 191 1030 1100 MDZ4082971.1 hypothetical protein [Bdellovibrionales bacterium] diamond 213 57 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30913417 30913417 PRJNA283169_P_NODE_4674_length_196_cov_1.238095_g4611_i0 PRJNA283169 4674 196 1.238095 2.4266662 Bdellovibrio 958 Bacteria Bacteria 115 8.160000000000001e-29   NR MBY0413485.1 2053517 g4611 i0 85.9 1.95918367346939 64 9 98 0 195 4 281 344 MBY0413485.1 phospholipase D family protein [Bdellovibrionales bacterium] diamond 384 116 0.991379310344828 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32336639 32336639 PRJNA283169_P_NODE_1559_length_323_cov_1.120438_g1497_i0 PRJNA283169 1559 323 1.120438 3.61901474 Pseudomonadati 3379134 Bacteria Bacteria 50.1 2.6e-4   NR OFZ40669.1 1797398 g1497 i0 49.1 1.86687306501548 57 28 52.9 1 276 106 228 283 OFZ40669.1 MAG: hypothetical protein A2485_15915, partial [Bdellovibrionales bacterium RIFOXYC12_FULL_39_17] diamond 603 50.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYC12_FULL_39_17
32540486 32540486 PRJNA283169_P_NODE_2539_length_259_cov_1.161905_g2477_i0 PRJNA283169 2539 259 1.161905 3.00933395 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 124 1.3e-30   NR WP_061836132.1 959 g2477 i0 67.4 0.996138996138996 86 28 99.6 0 258 1 382 467 WP_061836132.1 translocation/assembly module TamB domain-containing protein [Bdellovibrio bacteriovorus] diamond 258 124 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;