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contig_metadata

13 rows where bioproject = "PRJNA283169" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 13 ✖

bioproject 1

  • PRJNA283169 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646586 1646586 PRJNA283169_P_NODE_5682_length_179_cov_2.430769_g5619_i0 PRJNA283169 5682 179 2.430769 4.35107651 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 3.26e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g5619 i0 100 16.0949720670391 31 0 17 0 24 54 30034 30004 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2881 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
2922471 2922471 PRJNA283169_P_NODE_8263_length_152_cov_2.077670_g8200_i0 PRJNA283169 8263 152 2.07767 3.1580584 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 7.43e-5   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g8200 i0 97.222 18.9868421052632 36 0 24 1 113 148 30004 30038 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2886 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5475186 5475186 PRJNA283169_P_NODE_5365_length_185_cov_0.963235_g5302_i0 PRJNA283169 5365 185 0.963235 1.78198475 Betacoronavirus pandemicum 3418604 Viruses Viruses 63.9 7.3e-6   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g5302 i0 100 15.5891891891892 34 0 18 0 137 170 30004 30037 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2884 63.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6749483 6749483 PRJNA283169_P_NODE_5886_length_176_cov_2.157480_g5823_i0 PRJNA283169 5886 176 2.15748 3.7971648 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 8.87e-5   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g5823 i0 100 16.375 32 0 18 0 135 166 30004 30035 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2882 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6749492 6749492 PRJNA283169_P_NODE_6806_length_167_cov_0.872881_g6743_i0 PRJNA283169 6806 167 0.872881 1.45771127 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 3.01e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g6743 i0 100 21.562874251497 31 0 19 0 13 43 30034 30004 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3601 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
10575719 10575719 PRJNA283169_P_NODE_3649_length_217_cov_1.613095_g3586_i0 PRJNA283169 3649 217 1.613095 3.50041615 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 1.15e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g3586 i0 100 13.2811059907834 32 0 15 0 135 166 30004 30035 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2882 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11850425 11850425 PRJNA283169_P_NODE_4070_length_207_cov_4.265823_g4007_i0 PRJNA283169 4070 207 4.265823 8.83025361 Betacoronavirus pandemicum 3418604 Viruses Viruses 67.6 6.47e-7   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g4007 i0 93.478 13.9903381642512 46 2 22 1 7 52 30045 30001 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2896 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11850443 11850443 PRJNA283169_P_NODE_5510_length_182_cov_1.278195_g5447_i0 PRJNA283169 5510 182 1.278195 2.3263149 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 9.25e-5   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g5447 i0 100 16.3571428571429 32 0 18 0 45 76 30033 30002 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2977 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11850472 11850472 PRJNA283169_P_NODE_8070_length_162_cov_0.920354_g8007_i0 PRJNA283169 8070 162 0.920354 1.49097348 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 2.9e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g8007 i0 97.143 17.8086419753086 35 0 22 1 5 39 30037 30004 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2885 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14400811 14400811 PRJNA283169_P_NODE_7732_length_163_cov_1.342105_g7669_i0 PRJNA283169 7732 163 1.342105 2.18763115 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 2.92e-4   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g7669 i0 100 17.6748466257669 31 0 19 0 12 42 30033 30003 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2881 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20773288 20773288 PRJNA283169_P_NODE_6097_length_173_cov_1.467742_g6034_i0 PRJNA283169 6097 173 1.467742 2.53919366 Betacoronavirus pandemicum 3418604 Viruses Viruses 56.5 0.001   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g6034 i0 100 16.0982658959538 30 0 17 0 18 47 30032 30003 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2785 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
24597927 24597927 PRJNA283169_P_NODE_7540_length_164_cov_0.904348_g7477_i0 PRJNA283169 7540 164 0.904348 1.48313072 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 8.18e-5   NTclustered gi|2046846597|emb|OU077603.1| 2697049 g7477 i0 100 23.3658536585366 32 0 20 0 10 41 30035 30004 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3832 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
32020053 32020053 PRJNA283169_P_NODE_7258_length_165_cov_0.896552_g7195_i0 PRJNA283169 7258 165 0.896552 1.4793108 Fiersviridae 2842319 Viruses Viruses 45.8 0.00108   NR YP_010769635.1 2786202 g7195 i0 46 1.92727272727273 50 24 85.5 1 159 19 165 214 YP_010769635.1 maturation protein [ssRNA phage Gerhypos.1_20] diamond 318 45.8 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Oxychlovirus Oxychlovirus tellurivivens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;