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contig_metadata

4 rows where bioproject = "PRJNA283169", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA283169 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27105545 27105545 PRJNA283169_S_NODE_3422_length_162_cov_0.097345_g3408_i0 PRJNA283169 3422 162 0.097345 0.1576989 Ignavibacteria bacterium 2053306 Bacteria Bacteria 49.3 5.76e-5   NR NOS85234.1 2053306 g3408 i0 43.4 1.96296296296296 53 30 98.1 0 3 161 190 242 NOS85234.1 hypothetical protein [Ignavibacteria bacterium] diamond 318 49.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28716396 28716396 PRJNA283169_S_NODE_2407_length_185_cov_0.058824_g2393_i0 PRJNA283169 2407 185 0.058824 0.1088244 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 85.5 4.87e-18   NR HEY6435056.1 2651163 g2393 i0 55 0.972972972972973 60 27 97.3 0 1 180 146 205 HEY6435056.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 180 85.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31749133 31749133 PRJNA283169_P_NODE_5997_length_175_cov_1.214286_g5934_i0 PRJNA283169 5997 175 1.214286 2.1250005 Ignavibacteria bacterium 2053306 Bacteria Bacteria 96.7 1.0100000000000002e-21   NR MBK8982700.1 2053306 g5934 i0 75.9 0.994285714285714 58 14 99.4 0 2 175 339 396 MBK8982700.1 AAA family ATPase [Ignavibacteria bacterium] diamond 174 96.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32223931 32223931 PRJNA283169_P_NODE_3438_length_224_cov_1.091429_g3375_i0 PRJNA283169 3438 224 1.091429 2.44480096 Ignavibacteria bacterium 2053306 Bacteria Bacteria 136 4.29e-38   NR MBP9191548.1 2053306 g3375 i0 87.8 6.83035714285714 74 9 99.1 0 223 2 94 167 MBP9191548.1 7-cyano-7-deazaguanine synthase QueC [Ignavibacteria bacterium] diamond 1530 136 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;