contig_metadata
5 rows where bioproject = "PRJNA283169", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20185057 | 20185057 | PRJNA283169_S_NODE_916_length_275_cov_0.163717_g902_i0 | PRJNA283169 | 916 | 275 | 0.163717 | 0.45022175 | Gemmatimonas | 173479 | Bacteria | Bacteria | 108 | 5.32e-19 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g902 | i0 | 92.105 | 3.46545454545455 | 76 | 6 | 28 | 0 | 48 | 123 | 972680 | 972605 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 953 | 108 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 29127022 | 29127022 | PRJNA283169_P_NODE_3849_length_213_cov_0.945122_g3786_i0 | PRJNA283169 | 3849 | 213 | 0.945122 | 2.01310986 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 88.6 | 1.52e-19 | NR | TFG61846.1 | 2448054 | g3786 | i0 | 60.9 | 0.971830985915493 | 69 | 27 | 97.2 | 0 | 1 | 207 | 36 | 104 | TFG61846.1 MAG: hypothetical protein E4H28_08345, partial [Gemmatimonadales bacterium] | diamond | 207 | 88.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29934003 | 29934003 | PRJNA283169_P_NODE_5451_length_183_cov_1.164179_g5388_i0 | PRJNA283169 | 5451 | 183 | 1.164179 | 2.13044757 | FCB group | 1783270 | Bacteria | Bacteria | 47 | 5.02e-4 | NR | MCR4341997.1 | 2026741 | g5388 | i0 | 46.6 | 3.47540983606557 | 58 | 31 | 95.1 | 0 | 9 | 182 | 68 | 125 | MCR4341997.1 PD-(D/E)XK nuclease-like domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 636 | 47 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30516437 | 30516437 | PRJNA283169_S_NODE_1393_length_231_cov_0.120879_g1379_i0 | PRJNA283169 | 1393 | 231 | 0.120879 | 0.27923049 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 101 | 6.1e-23 | NR | MBK6423886.1 | 2026742 | g1379 | i0 | 86.2 | 0.753246753246753 | 58 | 8 | 75.3 | 0 | 231 | 58 | 174 | 231 | MBK6423886.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 174 | 101 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32463109 | 32463109 | PRJNA283169_P_NODE_1899_length_296_cov_0.805668_g1837_i0 | PRJNA283169 | 1899 | 296 | 0.805668 | 2.3847772800000002 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.8 | 0.00115 | NR | MBA3645311.1 | 2026741 | g1837 | i0 | 60.6 | 0.628378378378378 | 33 | 9 | 29.4 | 1 | 12 | 98 | 75 | 107 | MBA3645311.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 186 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;