RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA283169", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA283169 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27010745 27010745 PRJNA283169_P_NODE_8102_length_162_cov_0.911504_g8039_i0 PRJNA283169 8102 162 0.911504 1.47663648 Vampirovibrionales bacterium 2692181 Bacteria Bacteria 104 2.5699999999999997e-24   NR MEB3244940.1 2692181 g8039 i0 88.9 5 54 6 100 0 162 1 283 336 MEB3244940.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Vampirovibrionales bacterium] diamond 810 104 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales     Vampirovibrionales bacterium
29979343 29979343 PRJNA283169_S_NODE_2491_length_182_cov_0.060150_g2477_i0 PRJNA283169 2491 182 0.06015 0.109473 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 108 7.69e-26   NR MDD9898265.1 2052166 g2477 i0 85 0.989010989010989 60 9 98.9 0 182 3 481 540 MDD9898265.1 ribonucleoside-diphosphate reductase subunit alpha [Candidatus Melainabacteria bacterium] diamond 180 108 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;