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contig_metadata

25 rows where bioproject = "PRJNA280983" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 25 ✖

bioproject 1

  • PRJNA280983 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371645 371645 PRJNA280983_P_NODE_1_length_8300_cov_29.676160_g0_i0 PRJNA280983 1 8300 29.67616 2463.12128 Zebrafish picornavirus 1 2304617 Viruses Viruses 11703 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g0 i0 99.921 3.0544578313253 6354 2 99 1 1902 8252 1874 8227 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 25352 11703 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
1646439 1646439 PRJNA280983_P_NODE_2322_length_465_cov_14.980769_g2209_i0 PRJNA280983 2322 465 14.980769 69.66057585 brine shrimp yue-like virus 7 2900459 Viruses Viruses 780 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g2209 i0 98.858 4.70967741935484 438 4 94 1 1 438 2181 2617 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 2190 780 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
1646445 1646445 PRJNA280983_P_NODE_3522_length_361_cov_8.323718_g3407_i0 PRJNA280983 3522 361 8.323718 30.04862198 brine shrimp yue-like virus 7 2900459 Viruses Viruses 606 5.819999999999997e-169   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g3407 i0 99.698 4.58448753462604 331 1 92 0 31 361 862 532 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1655 606 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
8024944 8024944 PRJNA280983_P_NODE_4447_length_312_cov_4.159696_g4332_i0 PRJNA280983 4447 312 4.159696 12.97825152 brine shrimp yue-like virus 7 2900459 Viruses Viruses 510 4e-140   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g4332 i0 99.642 4.47115384615385 279 1 89 0 34 312 6130 6408 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1395 510 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
8024960 8024960 PRJNA280983_P_NODE_7807_length_202_cov_1.267974_g7692_i0 PRJNA280983 7807 202 1.267974 2.56130748 Caudoviricetes sp. 2832643 Viruses Viruses 374 3.3e-99   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g7692 i0 100 1 202 0 100 0 1 202 20132 20333 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 202 374 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12537476 12537476 PRJNA280983_P_NODE_10270_length_165_cov_0.879310_g10155_i0 PRJNA280983 10270 165 0.87931 1.4508615 Pahexavirus 1982251 Viruses Viruses 283 4.4899999999999995e-72   NTclustered gi|543171540|ref|NC_022340.1| 1235656 g10155 i0 97.576 100.030303030303 165 4 100 0 1 165 5224 5388 Propionibacterium phage PHL114L00, complete genome blastn 16505 283 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus PHL114L00
22048127 22048127 PRJNA280983_P_NODE_1598_length_584_cov_2.942056_g1488_i0 PRJNA280983 1598 584 2.942056 17.18160704 brine shrimp reovirus 1 2900474 Viruses Viruses 1062 0   NTclustered gi|2209095661|gb|OL472736.1| 2900474 g1488 i0 99.486 20.9948630136986 584 3 100 0 1 584 3004 2421 MAG: Brine shrimp reovirus 1 isolate SC/15 segment 3 hypothetical protein gene, complete cds blastn 12261 1062 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     brine shrimp reovirus 1
26915897 26915897 PRJNA280983_P_NODE_4522_length_308_cov_2.142857_g4407_i0 PRJNA280983 4522 308 2.142857 6.59999956 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 124 1.87e-30   NR XCM67741.1 3003959 g4407 i0 61.3 0.905844155844156 93 33 90.6 1 301 23 1709 1798 XCM67741.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 279 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27390352 27390352 PRJNA280983_P_NODE_583_length_969_cov_5.985870_g508_i0 PRJNA280983 583 969 5.98587 58.0030803 Pseudomonas phage pPa_SNUABM_DT 2820398 Viruses Viruses 127 1.83e-31   NR QTH80335.1 2820398 g508 i0 31.5 0.619195046439629 200 130 60.4 3 758 174 4 201 QTH80335.1 hypothetical protein PA10_00135 [Pseudomonas phage pPa_SNUABM_DT01] diamond 600 127 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Pseudomonas phage pPa_SNUABM_DT01
27453539 27453539 PRJNA280983_P_NODE_10743_length_163_cov_1.789474_g10628_i0 PRJNA280983 10743 163 1.789474 2.91684262 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 57 1.19e-7   NR XCM68142.1 3003959 g10628 i0 51.9 0.993865030674847 54 26 99.4 0 163 2 147 200 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 162 57 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27516476 27516476 PRJNA280983_P_NODE_9323_length_174_cov_1.224000_g9208_i0 PRJNA280983 9323 174 1.224 2.12976 Zebrafish jaw poxvirus RQ14 Viruses Viruses 54.3 1.16e-6   NR BCT22626.1 RQ14 g9208 i0 42.9 0.96551724137931 56 32 96.6 0 169 2 236 291 BCT22626.1 putative DNA-binding virion core protein [Carp edema virus] diamond 168 54.3 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
27579565 27579565 PRJNA280983_P_NODE_11044_length_162_cov_0.902655_g10929_i0 PRJNA280983 11044 162 0.902655 1.4623011 Helianthus annuus leaf-associated totivirus 6 2883720 Viruses Viruses 50.4 2.32e-5   NR UMQ74227.1 2883720 g10929 i0 55.3 2.7037037037037 47 21 87 0 11 151 77 123 UMQ74227.1 capsid protein [Helianthus annuus leaf-associated totivirus 6] diamond 438 50.4 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Helianthus annuus leaf-associated totivirus 6
27674560 27674560 PRJNA280983_P_NODE_44_length_2369_cov_8.143966_g30_i0 PRJNA280983 44 2369 8.143966 192.93055454 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 703 2.0099999999999994e-222   NR UNY41988.1 3003959 g30 i0 52.7 0.845926551287463 668 301 83.5 8 2367 391 2277 2938 UNY41988.1 MAG: polyprotein [Picornavirales sp.] diamond 2004 703 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27706313 27706313 PRJNA280983_P_NODE_3804_length_345_cov_1.260135_g3689_i0 PRJNA280983 3804 345 1.260135 4.34746575 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 166 8.289999999999999e-45   NR XCM68142.1 3003959 g3689 i0 70.8 1.96521739130435 113 33 98.3 0 3 341 1422 1534 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 678 166 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28116286 28116286 PRJNA280983_P_NODE_105_length_1775_cov_2.404983_g80_i0 PRJNA280983 105 1775 2.404983 42.68844825 Zebrafish jaw poxvirus RQ14 Viruses Viruses 188 2.24e-46   NR BCT22474.1 RQ14 g80 i0 28.6 0.84 497 332 82.8 11 1729 260 2177 2657 BCT22474.1 surface glycoprotein [Carp edema virus] diamond 1491 188 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28432167 28432167 PRJNA280983_P_NODE_11286_length_161_cov_0.910714_g11171_i0 PRJNA280983 11286 161 0.910714 1.46624954 Zebrafish jaw poxvirus RQ14 Viruses Viruses 62 1.7e-9   NR BCT22680.1 RQ14 g11171 i0 54.7 0.987577639751553 53 24 98.8 0 2 160 204 256 BCT22680.1 DNA-directed RNA polymerase, 35 kD subunit [Carp edema virus] diamond 159 62 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28463851 28463851 PRJNA280983_P_NODE_8586_length_187_cov_1.478261_g8471_i0 PRJNA280983 8586 187 1.478261 2.76434807 Zebrafish jaw poxvirus RQ14 Viruses Viruses 45.4 9.76e-4   NR BCT22559.1 RQ14 g8471 i0 48.9 0.754010695187166 47 23 75.4 1 144 4 31 76 BCT22559.1 cytidine and deoxycytidylate deaminase [Carp edema virus] diamond 141 45.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
29063739 29063739 PRJNA280983_P_NODE_7708_length_204_cov_1.129032_g7593_i0 PRJNA280983 7708 204 1.129032 2.30322528 Erysiphales associated totivirus 6 2719858 Viruses Viruses 58.9 4.48e-8   NR QIP68055.1 2719858 g7593 i0 43.1 0.75 51 29 75 0 52 204 67 117 QIP68055.1 coat protein [Erysiphales associated totivirus 6] diamond 153 58.9 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Erysiphales associated totivirus 6
29410811 29410811 PRJNA280983_P_NODE_3509_length_362_cov_6.361022_g3394_i0 PRJNA280983 3509 362 6.361022 23.02689964 Austropuccinia psidii associated totivirus 2 3367766 Viruses Viruses 135 3.22e-34   NR XHV16799.1 3367766 g3394 i0 59.4 0.878453038674033 106 43 87.8 0 348 31 33 138 XHV16799.1 RNA-dependent RNA polymerase, partial [Austropuccinia psidii associated totivirus 2] diamond 318 135 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Austropuccinia psidii associated totivirus 2
29631645 29631645 PRJNA280983_P_NODE_2070_length_503_cov_1.808370_g1957_i0 PRJNA280983 2070 503 1.80837 9.0961011 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 191 1.2099999999999997e-52   NR XCM68142.1 3003959 g1957 i0 56.5 0.960238568588469 161 69 96 1 503 21 876 1035 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 483 191 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30484911 30484911 PRJNA280983_P_NODE_10293_length_165_cov_0.879310_g10178_i0 PRJNA280983 10293 165 0.87931 1.4508615 Totiviridae sp. 1955172 Viruses Viruses 93.2 2.14e-20   NR UHS72436.1 1955172 g10178 i0 75.9 0.981818181818182 54 13 98.2 0 163 2 458 511 UHS72436.1 MAG: putative RNA-dependent RNA polymerase [Totiviridae sp.] diamond 162 93.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
30818479 30818479 PRJNA280983_P_NODE_714_length_884_cov_1.616766_g628_i0 PRJNA280983 714 884 1.616766 14.29221144 Viruses 10239 Viruses Viruses 55.5 6.41e-5   NR WWV86444.1 1955170 g628 i0 25.1 1.91402714932127 183 105 56 7 189 683 28 196 WWV86444.1 MAG: hypothetical protein [Partitiviridae sp.] diamond 1692 55.5 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
30895742 30895742 PRJNA280983_P_NODE_1294_length_651_cov_8.425249_g1189_i0 PRJNA280983 1294 651 8.425249 54.84837099 Qianjiang noda-like virus 31 3348615 Viruses Viruses 302 1e-91   NR XHA85951.1 3348615 g1189 i0 65.7 0.981566820276498 213 73 98.2 0 639 1 92 304 XHA85951.1 MAG: polyprotein [Qianjiang noda-like virus 31] diamond 639 302 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Qianjiang noda-like virus 31
32223925 32223925 PRJNA280983_P_NODE_7438_length_210_cov_1.826087_g7323_i0 PRJNA280983 7438 210 1.826087 3.8347827 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 54.7 1.55e-6   NR XCM67741.1 3003959 g7323 i0 42.6 1.78571428571429 68 39 97.1 0 210 7 1318 1385 XCM67741.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 375 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32382086 32382086 PRJNA280983_P_NODE_8839_length_183_cov_0.828358_g8724_i0 PRJNA280983 8839 183 0.828358 1.51589514 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 108 1.09e-25   NR XCM68142.1 3003959 g8724 i0 81.7 0.983606557377049 60 11 98.4 0 181 2 1331 1390 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 180 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;