RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA280983", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 9 ✖

tax_phylum 1

  • Pisuviricota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA280983 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371645 371645 PRJNA280983_P_NODE_1_length_8300_cov_29.676160_g0_i0 PRJNA280983 1 8300 29.67616 2463.12128 Zebrafish picornavirus 1 2304617 Viruses Viruses 11703 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g0 i0 99.921 3.0544578313253 6354 2 99 1 1902 8252 1874 8227 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 25352 11703 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
26915897 26915897 PRJNA280983_P_NODE_4522_length_308_cov_2.142857_g4407_i0 PRJNA280983 4522 308 2.142857 6.59999956 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 124 1.87e-30   NR XCM67741.1 3003959 g4407 i0 61.3 0.905844155844156 93 33 90.6 1 301 23 1709 1798 XCM67741.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 279 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27453539 27453539 PRJNA280983_P_NODE_10743_length_163_cov_1.789474_g10628_i0 PRJNA280983 10743 163 1.789474 2.91684262 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 57 1.19e-7   NR XCM68142.1 3003959 g10628 i0 51.9 0.993865030674847 54 26 99.4 0 163 2 147 200 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 162 57 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27674560 27674560 PRJNA280983_P_NODE_44_length_2369_cov_8.143966_g30_i0 PRJNA280983 44 2369 8.143966 192.93055454 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 703 2.0099999999999994e-222   NR UNY41988.1 3003959 g30 i0 52.7 0.845926551287463 668 301 83.5 8 2367 391 2277 2938 UNY41988.1 MAG: polyprotein [Picornavirales sp.] diamond 2004 703 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27706313 27706313 PRJNA280983_P_NODE_3804_length_345_cov_1.260135_g3689_i0 PRJNA280983 3804 345 1.260135 4.34746575 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 166 8.289999999999999e-45   NR XCM68142.1 3003959 g3689 i0 70.8 1.96521739130435 113 33 98.3 0 3 341 1422 1534 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 678 166 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29631645 29631645 PRJNA280983_P_NODE_2070_length_503_cov_1.808370_g1957_i0 PRJNA280983 2070 503 1.80837 9.0961011 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 191 1.2099999999999997e-52   NR XCM68142.1 3003959 g1957 i0 56.5 0.960238568588469 161 69 96 1 503 21 876 1035 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 483 191 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30818479 30818479 PRJNA280983_P_NODE_714_length_884_cov_1.616766_g628_i0 PRJNA280983 714 884 1.616766 14.29221144 Viruses 10239 Viruses Viruses 55.5 6.41e-5   NR WWV86444.1 1955170 g628 i0 25.1 1.91402714932127 183 105 56 7 189 683 28 196 WWV86444.1 MAG: hypothetical protein [Partitiviridae sp.] diamond 1692 55.5 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
32223925 32223925 PRJNA280983_P_NODE_7438_length_210_cov_1.826087_g7323_i0 PRJNA280983 7438 210 1.826087 3.8347827 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 54.7 1.55e-6   NR XCM67741.1 3003959 g7323 i0 42.6 1.78571428571429 68 39 97.1 0 210 7 1318 1385 XCM67741.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 375 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32382086 32382086 PRJNA280983_P_NODE_8839_length_183_cov_0.828358_g8724_i0 PRJNA280983 8839 183 0.828358 1.51589514 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 108 1.09e-25   NR XCM68142.1 3003959 g8724 i0 81.7 0.983606557377049 60 11 98.4 0 181 2 1331 1390 XCM68142.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 180 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;