RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA280983", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA280983 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27990192 27990192 PRJNA280983_P_NODE_2025_length_511_cov_3.290043_g1912_i0 PRJNA280983 2025 511 3.290043 16.81211973 Kofleriaceae bacterium 2212474 Bacteria Bacteria 45.1 0.0185   NR HEY0990064.1 2212474 g1912 i0 38.5 0.38160469667319 65 39 38.2 1 25 219 64 127 HEY0990064.1 hypothetical protein [Kofleriaceae bacterium] diamond 195 45.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
32445560 32445560 PRJNA280983_P_NODE_9379_length_173_cov_1.645161_g9264_i0 PRJNA280983 9379 173 1.645161 2.84612853 Myxococcota bacterium 2818507 Bacteria Bacteria 42 0.0275   NR MEE8410011.1 2818507 g9264 i0 41.5 0.919075144508671 53 31 91.9 0 4 162 383 435 MEE8410011.1 hypothetical protein [Myxococcota bacterium] diamond 159 42 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;