RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA280983" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA280983 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28165691 28165691 PRJNA280983_P_NODE_7265_length_214_cov_15.539394_g7150_i0 PRJNA280983 7265 214 15.539394 33.25430316 Metazoa 33208 Annelida Annelida 53.5 4.4e-7   NR KAK2188180.1 27915 g7150 i0 54.8 2.31308411214953 42 19 58.9 0 200 75 31 72 KAK2188180.1 hypothetical protein NP493_142g03002 [Ridgeia piscesae] diamond 495 53.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30660492 30660492 PRJNA280983_P_NODE_11053_length_162_cov_0.902655_g10938_i0 PRJNA280983 11053 162 0.902655 1.4623011 Metazoa 33208 Annelida Annelida 75.9 2.51e-14   NR CAH1787214.1 6347 g10938 i0 84.4 15.7777777777778 45 7 83.3 0 137 3 40 84 CAH1787214.1 unnamed protein product [Owenia fusiformis] diamond 2556 76.3 0.99475753604194 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32445556 32445556 PRJNA280983_P_NODE_10379_length_165_cov_0.879310_g10264_i0 PRJNA280983 10379 165 0.87931 1.4508615 Lamellibrachia satsuma 104711 Annelida Annelida 82.4 4.83e-19   NR KAI0243413.1 104711 g10264 i0 95.2 3.05454545454545 42 2 76.4 0 128 3 1 42 KAI0243413.1 ADP-ribosylation factor-like protein 1 [Lamellibrachia satsuma] diamond 504 82.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;