RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA280983", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA280983 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371642 371642 PRJNA280983_P_NODE_11561_length_152_cov_2.543689_g11446_i0 PRJNA280983 11561 152 2.543689 3.86640728 Patella vulgata 6465 Mollusca Mollusca 128 2.01e-25   NTclustered gi|496494|emb|X79468.1| 6465 g11446 i0 82.353 9.63157894736842 153 21 99 6 1 150 903 754 P.vulgata alpha tub 2 mRNA blastn 1464 128 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
16949045 16949045 PRJNA280983_P_NODE_8254_length_193_cov_1.416667_g8139_i0 PRJNA280983 8254 193 1.416667 2.73416731 Octopus sinensis 2607531 Mollusca Mollusca 169 1.58e-37   NTclustered gi|1914645618|ref|XM_029794075.2| 2607531 g8139 i0 82.812 2.86528497409326 192 29 98 3 4 193 355 166 PREDICTED: Octopus sinensis 60S ribosomal protein L10 (LOC115223478), mRNA blastn 553 169 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
28810640 28810640 PRJNA280983_P_NODE_6028_length_248_cov_4.743719_g5913_i0 PRJNA280983 6028 248 4.743719 11.76442312 Octopus vulgaris 6645 Mollusca Mollusca 50.1 1.6e-5   NR CAI9716848.1 6645 g5913 i0 76 0.30241935483871 25 6 30.2 0 153 227 80 104 CAI9716848.1 RNA-directed DNA polymerase from mobile element jockey [Octopus vulgaris] diamond 75 50.1 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus vulgaris
31988310 31988310 PRJNA280983_P_NODE_9378_length_173_cov_1.645161_g9263_i0 PRJNA280983 9378 173 1.645161 2.84612853 Metazoa 33208 Mollusca Mollusca 107 1.69e-25   NR CAG2198199.1 6550 g9263 i0 82.1 17.393063583815 56 10 97.1 0 172 5 259 314 CAG2198199.1 DNA2 [Mytilus edulis] diamond 3009 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;