RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA280983" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA280983 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27516476 27516476 PRJNA280983_P_NODE_9323_length_174_cov_1.224000_g9208_i0 PRJNA280983 9323 174 1.224 2.12976 Zebrafish jaw poxvirus RQ14 Viruses Viruses 54.3 1.16e-6   NR BCT22626.1 RQ14 g9208 i0 42.9 0.96551724137931 56 32 96.6 0 169 2 236 291 BCT22626.1 putative DNA-binding virion core protein [Carp edema virus] diamond 168 54.3 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28116286 28116286 PRJNA280983_P_NODE_105_length_1775_cov_2.404983_g80_i0 PRJNA280983 105 1775 2.404983 42.68844825 Zebrafish jaw poxvirus RQ14 Viruses Viruses 188 2.24e-46   NR BCT22474.1 RQ14 g80 i0 28.6 0.84 497 332 82.8 11 1729 260 2177 2657 BCT22474.1 surface glycoprotein [Carp edema virus] diamond 1491 188 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28432167 28432167 PRJNA280983_P_NODE_11286_length_161_cov_0.910714_g11171_i0 PRJNA280983 11286 161 0.910714 1.46624954 Zebrafish jaw poxvirus RQ14 Viruses Viruses 62 1.7e-9   NR BCT22680.1 RQ14 g11171 i0 54.7 0.987577639751553 53 24 98.8 0 2 160 204 256 BCT22680.1 DNA-directed RNA polymerase, 35 kD subunit [Carp edema virus] diamond 159 62 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28463851 28463851 PRJNA280983_P_NODE_8586_length_187_cov_1.478261_g8471_i0 PRJNA280983 8586 187 1.478261 2.76434807 Zebrafish jaw poxvirus RQ14 Viruses Viruses 45.4 9.76e-4   NR BCT22559.1 RQ14 g8471 i0 48.9 0.754010695187166 47 23 75.4 1 144 4 31 76 BCT22559.1 cytidine and deoxycytidylate deaminase [Carp edema virus] diamond 141 45.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;