RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA280983", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA280983 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29916326 29916326 PRJNA280983_P_NODE_8871_length_182_cov_1.360902_g8756_i0 PRJNA280983 8871 182 1.360902 2.47684164 Chloroflexota bacterium 2026724 Bacteria Bacteria 58.5 4.35e-8   NR MEA2671793.1 2026724 g8756 i0 63.8 1.91208791208791 47 17 77.5 0 178 38 445 491 MEA2671793.1 F-type H+/Na+-transporting ATPase subunit beta [Chloroflexota bacterium] diamond 348 58.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31306365 31306365 PRJNA280983_P_NODE_9935_length_167_cov_0.864407_g9820_i0 PRJNA280983 9935 167 0.864407 1.44355969 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 64.3 3.24e-10   NR HUQ85556.1 2952938 g9820 i0 63.3 0.880239520958084 49 18 88 0 19 165 1 49 HUQ85556.1 DUF4012 domain-containing protein [Candidatus Limnocylindrales bacterium] diamond 147 64.3 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;