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contig_metadata

11 rows where bioproject = "PRJNA280983" and tax_clade = "Discoba"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA280983 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646463 1646463 PRJNA280983_P_NODE_802_length_838_cov_7.107731_g711_i0 PRJNA280983 802 838 7.107731 59.56278578 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 207 1.6999999999999998e-48   NTclustered gi|560190589|gb|KF633467.1| 91374 g711 i0 79.365 22.6241050119332 315 49 37 13 245 555 1604 1302 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 18959 207 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
4198751 4198751 PRJNA280983_P_NODE_1524_length_598_cov_1.684882_g1415_i0 PRJNA280983 1524 598 1.684882 10.07559436 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 534 4.8199999999999997e-147   NTclustered gi|227908931|gb|FJ807263.2| 56452 g1415 i0 83 50.7859531772575 600 92 99 10 4 598 647 53 Petalomonas cantuscygni strain AMOP1 elongation factor-like gene, partial cds blastn 30370 534 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
5475053 5475053 PRJNA280983_P_NODE_7025_length_221_cov_1.482558_g6910_i0 PRJNA280983 7025 221 1.482558 3.27645318 Bodonidae sp. RS407A2 429465 Euglenozoa other_Eukaryota 220 5.07e-53   NTclustered gi|134142284|gb|EF432480.1| 429465 g6910 i0 84.862 82.7058823529412 218 33 99 0 3 220 305 88 Bodonidae sp. RS407A2 clone A1 beta tubulin (btub) mRNA, partial cds blastn 18278 220 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. RS407A2
16949032 16949032 PRJNA280983_P_NODE_5894_length_253_cov_1.000000_g5779_i0 PRJNA280983 5894 253 1 2.53 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 231 2.75e-56   NTclustered gi|91983198|gb|DQ450539.1| 71804 g5779 i0 85.333 89.3280632411067 225 31 89 2 7 230 1016 793 Trypanosoma grayi beta tubulin gene, partial cds; alpha tubulin gene, complete cds; and beta tubulin gene, partial cds blastn 22600 231 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
18223334 18223334 PRJNA280983_P_NODE_6075_length_247_cov_1.545455_g5960_i0 PRJNA280983 6075 247 1.545455 3.81727385 Euglenozoa 33682 Euglenozoa other_Eukaryota 68.2 5.92e-13   NR QLA09593.1 3039 g5960 i0 68.6 1.26315789473684 51 15 61.9 1 153 1 11 60 QLA09593.1 40S small subunit ribosomal protein eS28 [Euglena gracilis] diamond 312 68.2 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
19497571 19497571 PRJNA280983_P_NODE_11116_length_162_cov_0.902655_g11001_i0 PRJNA280983 11116 162 0.902655 1.4623011 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 92.4 3.82e-20   NR KNH06231.1 1314962 g11001 i0 90.4 0.962962962962963 52 5 96.3 0 2 157 2 53 KNH06231.1 elongation factor 2 [Perkinsela sp. CCAP 1560/4] diamond 156 92.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
23323708 23323708 PRJNA280983_P_NODE_5519_length_265_cov_3.171296_g5404_i0 PRJNA280983 5519 265 3.171296 8.4039344 Stygiella incarcerata 1712417 Root_unresolved Root_unresolved 102 1.92e-26   NR ANM86223.1 1712417 g5404 i0 70.1 1.44905660377358 67 20 75.8 0 202 2 1 67 ANM86223.1 40S ribosomal protein S27-1 [Stygiella incarcerata] diamond 384 102 1 Eukaryota Discoba       Jakobida Stygiellidae Stygiella Stygiella incarcerata
24597774 24597774 PRJNA280983_P_NODE_5920_length_252_cov_1.083744_g5805_i0 PRJNA280983 5920 252 1.083744 2.73103488 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 76.6 6.97e-16   NR KAJ9467903.1 91374 g5805 i0 55.1 0.821428571428571 69 31 82.1 0 248 42 37 105 KAJ9467903.1 60S ribosomal protein L34 [Diplonema papillatum] diamond 207 76.6 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
30200265 30200265 PRJNA280983_P_NODE_10712_length_164_cov_0.886957_g10597_i0 PRJNA280983 10712 164 0.886957 1.45460948 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 55.8 3e-7   NR KAJ9462802.1 91374 g10597 i0 47.1 0.932926829268293 51 27 93.3 0 154 2 322 372 KAJ9462802.1 V-type proton ATPase subunit H [Diplonema papillatum] diamond 153 55.8 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32540480 32540480 PRJNA280983_P_NODE_9839_length_167_cov_0.864407_g9724_i0 PRJNA280983 9839 167 0.864407 1.44355969 Bodo saltans 75058 Euglenozoa other_Eukaryota 45.8 0.0011   NR CUG93253.1 75058 g9724 i0 44.2 0.934131736526946 52 29 93.4 0 162 7 668 719 CUG93253.1 Hypothetical protein, putative [Bodo saltans] diamond 156 45.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32855141 32855141 PRJNA280983_P_NODE_7860_length_201_cov_0.953947_g7745_i0 PRJNA280983 7860 201 0.953947 1.91743347 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 108 3.15e-28   NR KAJ9468330.1 91374 g7745 i0 74.6 1 67 17 100 0 1 201 2 68 KAJ9468330.1 40S ribosomal protein S23 [Diplonema papillatum] diamond 201 108 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;