RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA280983" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA280983 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29410809 29410809 PRJNA280983_P_NODE_11329_length_161_cov_0.910714_g11214_i0 PRJNA280983 11329 161 0.910714 1.46624954 Minisyncoccota bacterium 2053589 Bacteria Bacteria 70.5 1.87e-12   NR HUO50262.1 2053589 g11214 i0 83.3 0.670807453416149 36 6 67.1 0 161 54 353 388 HUO50262.1 ATP-binding protein [Candidatus Paceibacterota bacterium] diamond 108 70.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30232056 30232056 PRJNA280983_P_NODE_5992_length_249_cov_6.355000_g5877_i0 PRJNA280983 5992 249 6.355 15.82395 Patescibacteria group bacterium 2052139 Bacteria Bacteria 124 6.03e-32   NR MDQ5912993.1 2052139 g5877 i0 74.4 0.987951807228916 82 20 97.6 1 5 247 244 325 MDQ5912993.1 hypothetical protein [Patescibacteria group bacterium] diamond 246 124 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;