RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA278119", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA278119 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27200292 27200292 PRJNA278119_P_NODE_26142_length_193_cov_1.444444_g25893_i0 PRJNA278119 26142 193 1.444444 2.78777692 Erysiphe necator associated gammapartitivirus 2 2742541 Viruses Viruses 110 1.33e-26   NR QKK35394.1 2742541 g25893 i0 82.3 0.963730569948187 62 11 96.4 0 191 6 60 121 QKK35394.1 capsid protein [Erysiphe necator associated gammapartitivirus 2] diamond 186 110 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Gammapartitivirus Erysiphe necator associated gammapartitivirus 2
32809817 32809817 PRJNA278119_P_NODE_14160_length_293_cov_1.491803_g13911_i0 PRJNA278119 14160 293 1.491803 4.37098279 Gammapartitivirus 1511811 Viruses Viruses 59.7 5.61e-8   NR AYP71820.1 358008 g13911 i0 41 1.69965870307167 83 49 85 0 45 293 48 130 AYP71820.1 hypothetical protein [Aspergillus ochraceous virus] diamond 498 59.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Gammapartitivirus Gammapartitivirus aspergilli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;