RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA278119" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA278119 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19497258 19497258 PRJNA278119_P_NODE_31516_length_177_cov_0.992188_g31267_i0 PRJNA278119 31516 177 0.992188 1.75617276 Cyprinid herpesvirus 3 3050271 Viruses Viruses 145 2.4e-30   NTclustered gi|1063455627|gb|KX544842.1| 3050271 g31267 i0 92.233 4.59322033898305 103 7 58 1 2 104 228143 228042 Cyprinid herpesvirus 3 isolate PoB3, complete genome blastn 813 145 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Alloherpesviridae Cyvirus Cyprinid herpesvirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;