contig_metadata
27 rows where bioproject = "PRJNA278119", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6748889 | 6748889 | PRJNA278119_P_NODE_24246_length_201_cov_1.019737_g23997_i0 | PRJNA278119 | 24246 | 201 | 1.019737 | 2.04967137 | Roseiflexus sp. RS-1 | 357808 | Bacteria | Bacteria | 187 | 4.5899999999999985e-43 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g23997 | i0 | 83.663 | 7.99502487562189 | 202 | 29 | 100 | 3 | 1 | 201 | 1494 | 1296 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 1607 | 187 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 | ||
| 8711565 | 8711565 | PRJNA278119_P_NODE_4467_length_568_cov_22.454721_g4224_i0 | PRJNA278119 | 4467 | 568 | 22.454721 | 127.54281528 | Herpetosiphon | 64 | Bacteria | Bacteria | 377 | 8.14e-100 | NTclustered | gi|470482680|ref|NR_076546.1| | 65 | g4224 | i0 | 79.387 | 54.6302816901408 | 587 | 82 | 100 | 32 | 1 | 568 | 572 | 6 | Herpetosiphon aurantiacus strain DSM 785 23S ribosomal RNA gene, complete sequence | blastn | 31030 | 377 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Herpetosiphonales | Herpetosiphonaceae | Herpetosiphon | Herpetosiphon aurantiacus | ||
| 9299392 | 9299392 | PRJNA278119_P_NODE_31308_length_177_cov_1.554688_g31059_i0 | PRJNA278119 | 31308 | 177 | 1.554688 | 2.75179776 | Anaerolinea thermophila | 167964 | Bacteria | Bacteria | 172 | 1.0999999999999999e-38 | NTclustered | gi|319993263|dbj|AP012029.1| | 926569 | g31059 | i0 | 90.37 | 97.6666666666667 | 135 | 8 | 75 | 5 | 10 | 142 | 198095 | 198226 | Anaerolinea thermophila UNI-1 DNA, complete genome | blastn | 17287 | 172 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Anaerolinea | Anaerolinea thermophila | ||
| 13125056 | 13125056 | PRJNA278119_P_NODE_2551_length_767_cov_2.661560_g2330_i0 | PRJNA278119 | 2551 | 767 | 2.66156 | 20.4141652 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 760 | 0 | NTclustered | gi|2556906889|gb|CP129483.1| | 2073117 | g2330 | i0 | 97.95 | 150.831812255541 | 439 | 8 | 95 | 1 | 4 | 441 | 2030032 | 2029594 | MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome | blastn | 115688 | 760 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 18222715 | 18222715 | PRJNA278119_P_NODE_11775_length_335_cov_1.045455_g11527_i0 | PRJNA278119 | 11775 | 335 | 1.045455 | 3.50227425 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 470 | 7.36e-128 | NTclustered | gi|2556903179|gb|CP129482.1| | 2073117 | g11527 | i0 | 92.012 | 548.017910447761 | 338 | 22 | 100 | 5 | 1 | 335 | 3066872 | 3067207 | MAG: Anaerolineales bacterium isolate cMAG.14 chromosome, complete genome | blastn | 183586 | 470 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 18223185 | 18223185 | PRJNA278119_P_NODE_46075_length_162_cov_2.265487_g45826_i0 | PRJNA278119 | 46075 | 162 | 2.265487 | 3.67008894 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 231 | 1.6099999999999998e-56 | NTclustered | gi|2556903179|gb|CP129482.1| | 2073117 | g45826 | i0 | 92.593 | 266.302469135802 | 162 | 10 | 99 | 2 | 2 | 162 | 3067031 | 3066871 | MAG: Anaerolineales bacterium isolate cMAG.14 chromosome, complete genome | blastn | 43141 | 231 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 24597348 | 24597348 | PRJNA278119_P_NODE_26540_length_192_cov_1.090909_g26291_i0 | PRJNA278119 | 26540 | 192 | 1.090909 | 2.09454528 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 69.4 | 1.64e-7 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g26291 | i0 | 93.478 | 0.239583333333333 | 46 | 3 | 24 | 0 | 5 | 50 | 9732920 | 9732875 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 46 | 69.4 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 24597486 | 24597486 | PRJNA278119_P_NODE_34980_length_169_cov_0.866667_g34731_i0 | PRJNA278119 | 34980 | 169 | 0.866667 | 1.46466723 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 58.4 | 3.03e-4 | NTclustered | gi|2556906889|gb|CP129483.1| | 2073117 | g34731 | i0 | 97.059 | 0.621301775147929 | 34 | 1 | 20 | 0 | 127 | 160 | 3791396 | 3791429 | MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome | blastn | 105 | 58.4 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 26725486 | 26725486 | PRJNA278119_P_NODE_2241_length_821_cov_2.126943_g2030_i0 | PRJNA278119 | 2241 | 821 | 2.126943 | 17.46220203 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 368 | 2.71e-117 | NR | HND47414.1 | 2073117 | g2030 | i0 | 63 | 1.08526187576127 | 297 | 82 | 99.8 | 3 | 3 | 821 | 402 | 694 | HND47414.1 hypothetical protein [Anaerolineales bacterium] | diamond | 891 | 368 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 27136881 | 27136881 | PRJNA278119_P_NODE_5962_length_488_cov_2.234624_g5716_i0 | PRJNA278119 | 5962 | 488 | 2.234624 | 10.90496512 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 110 | 1.22e-24 | NR | HND47414.1 | 2073117 | g5716 | i0 | 45 | 0.860655737704918 | 140 | 61 | 78.7 | 7 | 3 | 386 | 183 | 318 | HND47414.1 hypothetical protein [Anaerolineales bacterium] | diamond | 420 | 110 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 27376564 | 27376564 | PRJNA278119_P_NODE_46423_length_162_cov_1.380531_g46174_i0 | PRJNA278119 | 46423 | 162 | 1.380531 | 2.23646022 | Bacteria | 2 | Bacteria | Bacteria | 81.6 | 1.76e-16 | NR | HEY7467127.1 | 2026734 | g46174 | i0 | 69.2 | 8.57407407407407 | 52 | 16 | 96.3 | 0 | 3 | 158 | 262 | 313 | HEY7467127.1 MBL fold metallo-hydrolase [Dehalococcoidia bacterium] | diamond | 1389 | 82.4 | 0.990291262135922 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 27390339 | 27390339 | PRJNA278119_P_NODE_44803_length_163_cov_1.210526_g44554_i0 | PRJNA278119 | 44803 | 163 | 1.210526 | 1.97315738 | Roseiflexaceae bacterium | 2762507 | Bacteria | Bacteria | 83.6 | 5.17e-17 | NR | HEU4326262.1 | 2762507 | g44554 | i0 | 75.9 | 0.993865030674847 | 54 | 13 | 99.4 | 0 | 1 | 162 | 519 | 572 | HEU4326262.1 S9 family peptidase [Roseiflexaceae bacterium] | diamond | 162 | 83.6 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexaceae bacterium | |||
| 28495404 | 28495404 | PRJNA278119_P_NODE_35167_length_169_cov_0.866667_g34918_i0 | PRJNA278119 | 35167 | 169 | 0.866667 | 1.46466723 | Roseiflexaceae bacterium | 2762507 | Bacteria | Bacteria | 112 | 1.26e-27 | NR | HEU5101156.1 | 2762507 | g34918 | i0 | 94.6 | 0.994082840236686 | 56 | 3 | 99.4 | 0 | 2 | 169 | 149 | 204 | HEU5101156.1 extracellular solute-binding protein [Roseiflexaceae bacterium] | diamond | 168 | 112 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexaceae bacterium | |||
| 28495421 | 28495421 | PRJNA278119_P_NODE_807_length_1315_cov_2.852291_g676_i0 | PRJNA278119 | 807 | 1315 | 2.852291 | 37.50762665 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 175 | 1.44e-44 | NR | HND47413.1 | 2073117 | g676 | i0 | 29.8 | 1.06539923954373 | 467 | 197 | 76.9 | 6 | 1315 | 305 | 171 | 636 | HND47413.1 Ty1/Copia family ribonuclease HI [Anaerolineales bacterium] | diamond | 1401 | 175 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 29112945 | 29112945 | PRJNA278119_P_NODE_46128_length_162_cov_1.840708_g45879_i0 | PRJNA278119 | 46128 | 162 | 1.840708 | 2.98194696 | PVC group | 1783257 | Bacteria | Bacteria | 46.6 | 5.58e-4 | NR | MCX6071241.1 | 2026724 | g45879 | i0 | 47.1 | 7.55555555555556 | 51 | 27 | 94.4 | 0 | 10 | 162 | 293 | 343 | MCX6071241.1 transketolase [Chloroflexota bacterium] | diamond | 1224 | 47 | 0.991489361702128 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 29789642 | 29789642 | PRJNA278119_P_NODE_33711_length_171_cov_1.278689_g33462_i0 | PRJNA278119 | 33711 | 171 | 1.278689 | 2.18655819 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 88.2 | 1.24e-18 | NR | MCC7207441.1 | 2052143 | g33462 | i0 | 78.6 | 3.98245614035088 | 56 | 12 | 98.2 | 0 | 4 | 171 | 91 | 146 | MCC7207441.1 orotidine-5'-phosphate decarboxylase [Anaerolineae bacterium] | diamond | 681 | 88.2 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 30091580 | 30091580 | PRJNA278119_P_NODE_36672_length_168_cov_0.873950_g36423_i0 | PRJNA278119 | 36672 | 168 | 0.87395 | 1.468236 | Bacillati | 1783272 | Bacteria | Bacteria | 43.1 | 0.00977 | NR | OGO06267.1 | 1797632 | g36423 | i0 | 53.8 | 9.25 | 39 | 18 | 69.6 | 0 | 119 | 3 | 231 | 269 | OGO06267.1 MAG: copper-translocating P-type ATPase, partial [Chloroflexi bacterium RBG_13_56_8] | diamond | 1554 | 43.5 | 0.990804597701149 | Bacteria | Bacillati | Chloroflexota | Chloroflexi bacterium RBG_13_56_8 | ||||||
| 30358924 | 30358924 | PRJNA278119_P_NODE_11012_length_349_cov_4.010000_g10765_i0 | PRJNA278119 | 11012 | 349 | 4.01 | 13.9949 | Dehalococcoidales bacterium | 2026733 | Bacteria | Bacteria | 90.5 | 1.76e-20 | NR | MDO9333994.1 | 2026733 | g10765 | i0 | 92.2 | 0.438395415472779 | 51 | 3 | 43 | 1 | 3 | 152 | 89 | 139 | MDO9333994.1 30S ribosomal protein S4 [Dehalococcoidales bacterium] | diamond | 153 | 90.5 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidales bacterium | ||||
| 30358952 | 30358952 | PRJNA278119_P_NODE_39672_length_166_cov_1.213675_g39423_i0 | PRJNA278119 | 39672 | 166 | 1.213675 | 2.0147005 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 54.3 | 1.06e-6 | NR | HND47414.1 | 2073117 | g39423 | i0 | 51 | 0.885542168674699 | 49 | 24 | 88.6 | 0 | 18 | 164 | 17 | 65 | HND47414.1 hypothetical protein [Anaerolineales bacterium] | diamond | 147 | 54.3 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 31021964 | 31021964 | PRJNA278119_P_NODE_14855_length_282_cov_1.484979_g14606_i0 | PRJNA278119 | 14855 | 282 | 1.484979 | 4.18764078 | Candidatus Lucifugimonas marina | 3038979 | Bacteria | Bacteria | 64.3 | 5.7e-10 | NR | WP_342835703.1 | 3038979 | g14606 | i0 | 67.4 | 1.37234042553191 | 43 | 14 | 45.7 | 0 | 153 | 281 | 158 | 200 | WP_342835703.1 NAD(P)-dependent oxidoreductase [Candidatus Lucifugimonas marina] | diamond | 387 | 64.3 | 1 | Bacteria | SAR202 cluster | Bacillati | Chloroflexota | Dehalococcoidia | Candidatus Lucifugimonadales | Candidatus Lucifugimonadaceae | Candidatus Lucifugimonas | Candidatus Lucifugimonas marina | |
| 31085172 | 31085172 | PRJNA278119_P_NODE_45955_length_163_cov_0.894737_g45706_i0 | PRJNA278119 | 45955 | 163 | 0.894737 | 1.45842131 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 53.1 | 2.7e-6 | NR | HET7770507.1 | 2026724 | g45706 | i0 | 84.8 | 0.607361963190184 | 33 | 5 | 60.7 | 0 | 100 | 2 | 388 | 420 | HET7770507.1 YfhO family protein [Chloroflexota bacterium] | diamond | 99 | 53.1 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 31116480 | 31116480 | PRJNA278119_P_NODE_20355_length_221_cov_1.808140_g20106_i0 | PRJNA278119 | 20355 | 221 | 1.80814 | 3.9959894 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 103 | 7.93e-24 | NR | HND47414.1 | 2073117 | g20106 | i0 | 59.7 | 0.97737556561086 | 72 | 29 | 97.7 | 0 | 1 | 216 | 728 | 799 | HND47414.1 hypothetical protein [Anaerolineales bacterium] | diamond | 216 | 103 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 31274734 | 31274734 | PRJNA278119_P_NODE_23035_length_206_cov_1.210191_g22786_i0 | PRJNA278119 | 23035 | 206 | 1.210191 | 2.49299346 | Ktedonobacteraceae bacterium | 2740538 | Bacteria | Bacteria | 69.3 | 4.07e-12 | NR | HZS76708.1 | 2740538 | g22786 | i0 | 46.2 | 2.14077669902913 | 78 | 32 | 99 | 2 | 204 | 1 | 84 | 161 | HZS76708.1 sulfotransferase [Ktedonobacteraceae bacterium] | diamond | 441 | 69.3 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Ktedonobacteraceae | Ktedonobacteraceae bacterium | |||
| 31749077 | 31749077 | PRJNA278119_P_NODE_12177_length_327_cov_1.859712_g11929_i0 | PRJNA278119 | 12177 | 327 | 1.859712 | 6.08125824 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 95.9 | 2.24e-20 | NR | HND47414.1 | 2073117 | g11929 | i0 | 60 | 0.688073394495413 | 75 | 27 | 66.1 | 1 | 322 | 107 | 801 | 875 | HND47414.1 hypothetical protein [Anaerolineales bacterium] | diamond | 225 | 95.9 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 31907379 | 31907379 | PRJNA278119_P_NODE_45817_length_163_cov_0.912281_g45568_i0 | PRJNA278119 | 45817 | 163 | 0.912281 | 1.48701803 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 81.3 | 3.26e-16 | NR | RPJ26839.1 | 2026724 | g45568 | i0 | 70.9 | 6.03680981595092 | 55 | 15 | 99.4 | 1 | 2 | 163 | 132 | 186 | RPJ26839.1 MAG: aminotransferase class V-fold PLP-dependent enzyme [Chloroflexota bacterium] | diamond | 984 | 81.3 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 32666232 | 32666232 | PRJNA278119_P_NODE_7540_length_433_cov_1.625000_g7293_i0 | PRJNA278119 | 7540 | 433 | 1.625 | 7.03625 | Anaerolineaceae bacterium | 2024896 | Bacteria | Bacteria | 144 | 2.82e-41 | NR | RJP51470.1 | 2024896 | g7293 | i0 | 58.4 | 1.7459584295612 | 125 | 47 | 83.1 | 1 | 422 | 63 | 2 | 126 | RJP51470.1 MAG: RidA family protein [Anaerolineaceae bacterium] | diamond | 756 | 144 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Anaerolineaceae bacterium | |||
| 32760707 | 32760707 | PRJNA278119_P_NODE_37100_length_168_cov_0.873950_g36851_i0 | PRJNA278119 | 37100 | 168 | 0.87395 | 1.468236 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 72 | 5.94e-13 | NR | MCH8062211.1 | 2026724 | g36851 | i0 | 56.4 | 0.982142857142857 | 55 | 24 | 98.2 | 0 | 2 | 166 | 318 | 372 | MCH8062211.1 6-phosphofructokinase [Chloroflexota bacterium] | diamond | 165 | 72 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;