RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA278119" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA278119 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27737797 27737797 PRJNA278119_P_NODE_25924_length_194_cov_1.075862_g25675_i0 PRJNA278119 25924 194 1.075862 2.08717228 Balneola vulgaris 287535 Bacteria Bacteria 49.3 3.02e-5   NR WP_018127186.1 287535 g25675 i0 54.5 1.37628865979381 44 18 68 1 56 187 39 80 WP_018127186.1 Hsp20/alpha crystallin family protein [Balneola vulgaris] diamond 267 49.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola vulgaris
30042482 30042482 PRJNA278119_P_NODE_9931_length_371_cov_1.850932_g9684_i0 PRJNA278119 9931 371 1.850932 6.86695772 Balneolaceae bacterium 2053516 Bacteria Bacteria 64.7 1.89e-10   NR MEX0647655.1 2053516 g9684 i0 50.9 0.897574123989218 55 27 44.5 0 203 367 48 102 MEX0647655.1 RidA family protein [Balneolaceae bacterium] diamond 333 64.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;