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contig_metadata

19 rows where bioproject = "PRJNA278119" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 19 ✖

bioproject 1

  • PRJNA278119 · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
371042 371042 PRJNA278119_P_NODE_141_length_2279_cov_5.303139_g106_i0 PRJNA278119 141 2279 5.303139 120.85853781 Jakapalmivirus bremiae 3429992 Viruses Viruses 3938 0   NTclustered gi|2842965605|gb|PQ150640.1| 2719804 g106 i0 98.015 5.65247915752523 2267 45 99 0 1 2267 2267 1 MAG: Bremia lactucae associated splipalmivirus 1 isolate Hebei_059 segment RNA2 RNA-dependent RNA polymerase gene, complete cds blastn 12882 3938 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Jakapalmivirus Jakapalmivirus bremiae
1645784 1645784 PRJNA278119_P_NODE_102_length_2542_cov_5.442439_g74_i0 PRJNA278119 102 2542 5.442439 138.34679938 Downy mildew lesion associated splipalmivirus 2 2719503 Viruses Viruses 4423 0   NTclustered gi|2284931862|gb|OM514591.1| 2719503 g74 i0 98.296 13.7824547600315 2524 43 99 0 19 2542 2530 7 MAG: Plasmopara viticola lesion associated narnavirus 2 isolate YSCLS230 RNA-dependent RNA polymerase gene, complete cds blastn 35035 4423 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 2
3609469 3609469 PRJNA278119_P_NODE_6723_length_459_cov_4.141463_g6477_i0 PRJNA278119 6723 459 4.141463 19.00931517 Botybirnavirus 1918013 Viruses Viruses 385 3.87e-102   NTclustered gi|1787383272|gb|MN552386.1| 2689573 g6477 i0 90.69 1.2636165577342 290 25 63 2 5 294 510 223 Plasmopara viticola lesion associated botybirna 1 isolate DMG-B_DN55388 segment RNA1 RNA dependent RNA polymerase gene, complete cds blastn 580 385 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Botybirnaviridae Botybirnavirus Botybirnavirus shichi
4198263 4198263 PRJNA278119_P_NODE_19884_length_225_cov_0.886364_g19635_i0 PRJNA278119 19884 225 0.886364 1.994319 Botourmiaviridae sp. 2808997 Viruses Viruses 322 1.38e-83   NTclustered gi|2320142594|gb|ON585070.1| 2808997 g19635 i0 92.444 15.08 225 17 100 0 1 225 911 687 MAG: Botourmiaviridae sp. isolate PMS13_Contig505 RNA-dependent RNA polymerase gene, complete cds blastn 3393 322 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
4198395 4198395 PRJNA278119_P_NODE_28964_length_184_cov_1.155556_g28715_i0 PRJNA278119 28964 184 1.155556 2.12622304 Botourmiaviridae sp. 2808997 Viruses Viruses 185 1.4799999999999998e-42   NTclustered gi|2320142588|gb|ON585067.1| 2808997 g28715 i0 84.865 2.85326086956522 185 26 100 2 1 184 901 718 MAG: Botourmiaviridae sp. isolate PMS2_Contig844 RNA-dependent RNA polymerase gene, complete cds blastn 525 185 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
4198482 4198482 PRJNA278119_P_NODE_3564_length_642_cov_2.097808_g3328_i0 PRJNA278119 3564 642 2.097808 13.46792736 Botourmiaviridae sp. 2808997 Viruses Viruses 715 0   NTclustered gi|2396040045|gb|ON813024.1| 2808997 g3328 i0 86.801 32.1105919003115 644 81 100 4 1 642 1465 824 MAG: Botourmiaviridae sp. isolate TIGMIC_38, complete genome blastn 20615 715 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
4198717 4198717 PRJNA278119_P_NODE_9244_length_387_cov_1.692308_g8997_i0 PRJNA278119 9244 387 1.692308 6.54923196 Pseudomonas phage phiZ98 2981625 Viruses Viruses 625 1.7399999999999994e-174   NTclustered gi|2316771794|gb|ON960066.1| 2981625 g8997 i0 95.855 1.99741602067183 386 16 99 0 2 387 1675 1290 Pseudomonas phage phiZ98 segment S, complete sequence blastn 773 625 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Pseudomonas phage phiZ98
5474506 5474506 PRJNA278119_P_NODE_1765_length_926_cov_15.140251_g1574_i0 PRJNA278119 1765 926 15.140251 140.19872426 Jakapalmivirus bremiae 3429992 Viruses Viruses 1574 0   NTclustered gi|2565320477|gb|OR060921.1| 2719804 g1574 i0 97.91 1.88552915766739 909 19 98 0 18 926 3 911 Bremia lactucae associated splipalmivirus 1 hypothetical protein gene, complete cds blastn 1746 1574 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Jakapalmivirus Jakapalmivirus bremiae
5474622 5474622 PRJNA278119_P_NODE_25805_length_194_cov_1.793103_g25556_i0 PRJNA278119 25805 194 1.793103 3.47861982 Sopafab virus 3131770 Viruses Viruses 263 7.11e-66   NTclustered gi|2717323354|gb|PP174071.1| 3131770 g25556 i0 91.414 17.2268041237113 198 8 99 9 2 194 3042 3235 MAG: Sopafab virus isolate SP1C_k141_220867 genomic sequence blastn 3342 263 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopafab virus
14400018 14400018 PRJNA278119_P_NODE_13392_length_306_cov_1.011673_g13144_i0 PRJNA278119 13392 306 1.011673 3.09571938 Pseudomonas phage phiZ98 2981625 Viruses Viruses 477 3.969999999999999e-130   NTclustered gi|2316771794|gb|ON960066.1| 2981625 g13144 i0 94.771 1.99346405228758 306 16 100 0 1 306 2204 2509 Pseudomonas phage phiZ98 segment S, complete sequence blastn 610 477 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Pseudomonas phage phiZ98
14400216 14400216 PRJNA278119_P_NODE_26892_length_191_cov_0.971831_g26643_i0 PRJNA278119 26892 191 0.971831 1.85619721 Botourmiaviridae sp. 2808997 Viruses Viruses 185 1.5499999999999998e-42   NTclustered gi|2320142604|gb|ON585075.1| 2808997 g26643 i0 89.726 0.764397905759162 146 13 76 2 1 145 1760 1616 MAG: Botourmiaviridae sp. isolate PMS8_Contig168 RNA-dependent RNA polymerase gene, complete cds blastn 146 185 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
15674151 15674151 PRJNA278119_P_NODE_41533_length_165_cov_0.896552_g41284_i0 PRJNA278119 41533 165 0.896552 1.4793108 Hulunbuir Botou tick virus 7 2972067 Viruses Viruses 267 4.53e-67   NTclustered gi|2819063280|gb|PQ150492.1| 2972067 g41284 i0 95.758 5.46060606060606 165 7 100 0 1 165 1900 1736 MAG: Hulunbuir Botou tick virus 7 isolate Hebei_059 genomic sequence blastn 901 267 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Hulunbuir Botou tick virus 7
17636453 17636453 PRJNA278119_P_NODE_34394_length_169_cov_1.733333_g34145_i0 PRJNA278119 34394 169 1.733333 2.92933277 Botybirnavirus 1918013 Viruses Viruses 145 2.26e-30   NTclustered gi|1787383272|gb|MN552386.1| 2689573 g34145 i0 82.558 2.03550295857988 172 23 100 7 1 169 153 320 Plasmopara viticola lesion associated botybirna 1 isolate DMG-B_DN55388 segment RNA1 RNA dependent RNA polymerase gene, complete cds blastn 344 145 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Botybirnaviridae Botybirnavirus Botybirnavirus shichi
18222864 18222864 PRJNA278119_P_NODE_21855_length_212_cov_1.116564_g21606_i0 PRJNA278119 21855 212 1.116564 2.36711568 Grapevine wood holobiome associated mycobunyavirales-like virus 2 3381423 Viruses Viruses 353 4.56e-93   NTclustered gi|2853283008|gb|PQ508375.1| 3381423 g21606 i0 96.698 1 212 7 100 0 1 212 165 376 Grapevine wood holobiome associated mycobunyavirales-like virus 2 isolate c22 segment RNA3 nucleocapsid gene, complete cds blastn 212 353 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Grapevine wood holobiome associated mycobunyavirales-like virus 2
27200292 27200292 PRJNA278119_P_NODE_26142_length_193_cov_1.444444_g25893_i0 PRJNA278119 26142 193 1.444444 2.78777692 Erysiphe necator associated gammapartitivirus 2 2742541 Viruses Viruses 110 1.33e-26   NR QKK35394.1 2742541 g25893 i0 82.3 0.963730569948187 62 11 96.4 0 191 6 60 121 QKK35394.1 capsid protein [Erysiphe necator associated gammapartitivirus 2] diamond 186 110 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Gammapartitivirus Erysiphe necator associated gammapartitivirus 2
31717578 31717578 PRJNA278119_P_NODE_25017_length_198_cov_0.973154_g24768_i0 PRJNA278119 25017 198 0.973154 1.92684492 Plasmopara viticola lesion associated mononegaambi virus 9 2692021 Viruses Viruses 118 4.16e-29   NR YP_010798441.1 2692021 g24768 i0 84.4 0.96969696969697 64 10 97 0 2 193 1871 1934 YP_010798441.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated mononegaambi virus 9] diamond 192 118 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Penicillimonavirus Penicillimonavirus etaplasmoparae
31812470 31812470 PRJNA278119_P_NODE_19697_length_226_cov_1.124294_g19448_i0 PRJNA278119 19697 226 1.124294 2.54090444 Botourmiaviridae sp. 2808997 Viruses Viruses 56.6 3.82e-7   NR WAK77973.1 2808997 g19448 i0 87.1 0.411504424778761 31 4 41.2 0 1 93 482 512 WAK77973.1 MAG: RNA-dependent RNA polymerase [Botourmiaviridae sp.] diamond 93 56.6 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
32589624 32589624 PRJNA278119_P_NODE_33519_length_171_cov_1.975410_g33270_i0 PRJNA278119 33519 171 1.97541 3.3779511 Scleroulivirus 2560226 Viruses Viruses 67.4 2.89e-11   NR YP_010800270.1 2686549 g33270 i0 84.6 2.05263157894737 39 5 68.4 1 1 117 597 634 YP_010800270.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated ourmia-like virus 76] diamond 351 67.4 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Scleroulivirus Scleroulivirus omicronplasmoparae
32809817 32809817 PRJNA278119_P_NODE_14160_length_293_cov_1.491803_g13911_i0 PRJNA278119 14160 293 1.491803 4.37098279 Gammapartitivirus 1511811 Viruses Viruses 59.7 5.61e-8   NR AYP71820.1 358008 g13911 i0 41 1.69965870307167 83 49 85 0 45 293 48 130 AYP71820.1 hypothetical protein [Aspergillus ochraceous virus] diamond 498 59.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Gammapartitivirus Gammapartitivirus aspergilli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;