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contig_metadata

7 rows where bioproject = "PRJNA278119" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA278119 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27502744 27502744 PRJNA278119_P_NODE_34883_length_169_cov_0.866667_g34634_i0 PRJNA278119 34883 169 0.866667 1.46466723 root 1 Root_unresolved Root_unresolved 48.9 8.76e-5   NR WP_188148798.1 2251 g34634 i0 41.5 5.73372781065089 53 31 94.1 0 161 3 67 119 WP_188148798.1 MULTISPECIES: vWA domain-containing protein [Haloferax] diamond 969 49.3 0.991886409736308 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax  
27706293 27706293 PRJNA278119_P_NODE_34564_length_169_cov_1.300000_g34315_i0 PRJNA278119 34564 169 1.3 2.197 Methanobacteriota archaeon 2026739 Archaea Archaea 42.4 0.019   NR MEA1865341.1 2026739 g34315 i0 44.6 0.994082840236686 56 19 99.4 2 1 168 112 155 MEA1865341.1 hypothetical protein [Methanobacteriota archaeon] diamond 168 42.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28337399 28337399 PRJNA278119_P_NODE_31566_length_176_cov_2.047244_g31317_i0 PRJNA278119 31566 176 2.047244 3.60314944 Methanosphaera sp. 2666342 Archaea Archaea 42.7 0.015   NR MEE3419418.1 2666342 g31317 i0 45.7 1.03977272727273 35 19 59.7 0 106 2 73 107 MEE3419418.1 phospholipid scramblase-related protein [Methanosphaera sp.] diamond 183 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
29252779 29252779 PRJNA278119_P_NODE_38189_length_167_cov_0.881356_g37940_i0 PRJNA278119 38189 167 0.881356 1.47186452 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 88.6 9.41e-19   NR WP_297827855.1 253161 g37940 i0 87.3 0.988023952095808 55 7 98.8 0 2 166 531 585 WP_297827855.1 hypothetical protein, partial [uncultured Methanobrevibacter sp.] diamond 165 88.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30295666 30295666 PRJNA278119_P_NODE_24332_length_200_cov_1.509934_g24083_i0 PRJNA278119 24332 200 1.509934 3.019868 Methanosarcina sp. 2213 Archaea Archaea 72.8 4.33e-13   NR HET8689160.1 2213 g24083 i0 53 1.98 66 31 99 0 199 2 52 117 HET8689160.1 ribonucleotide-diphosphate reductase subunit beta [Methanosarcina sp.] diamond 396 72.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30327360 30327360 PRJNA278119_P_NODE_19452_length_228_cov_1.162011_g19203_i0 PRJNA278119 19452 228 1.162011 2.64938508 Methanobrevibacter sp. 66852 Archaea Archaea 88.2 4.52e-19   NR MBO7211516.1 66852 g19203 i0 54.8 0.960526315789474 73 33 96.1 0 228 10 149 221 MBO7211516.1 tRNA(His) guanylyltransferase Thg1 family protein [Methanobrevibacter sp.] diamond 219 88.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31260883 31260883 PRJNA278119_P_NODE_45295_length_163_cov_0.912281_g45046_i0 PRJNA278119 45295 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 45.4 0.00141   NR HII81021.1 2213 g45046 i0 40.8 1.63803680981595 49 29 90.2 0 163 17 297 345 HII81021.1 ParA family protein [Methanosarcina sp.] diamond 267 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;