RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA278119", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA278119 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5474485 5474485 PRJNA278119_P_NODE_16265_length_263_cov_0.971963_g16016_i0 PRJNA278119 16265 263 0.971963 2.55626269 Fungi 4751 Fungi Fungi 120 4.989999999999999e-31   NR KAI9140511.1 1500003 g16016 i0 71.4 3.44486692015209 77 22 87.8 0 233 3 2 78 KAI9140511.1 WD40-repeat-containing domain protein [Paraphysoderma sedebokerense] diamond 906 120 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
11850139 11850139 PRJNA278119_P_NODE_4750_length_551_cov_5.503984_g4506_i0 PRJNA278119 4750 551 5.503984 30.32695184 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 292 1.2399999999999996e-96   NR KNE67055.1 578462 g4506 i0 84.5 2.8529945553539 174 27 94.7 0 29 550 8 181 KNE67055.1 mitochondrial substrate carrier family protein ancA [Allomyces macrogynus ATCC 38327] diamond 1572 292 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
27849712 27849712 PRJNA278119_P_NODE_31824_length_176_cov_1.228346_g31575_i0 PRJNA278119 31824 176 1.228346 2.16188896 root 1 Root_unresolved Root_unresolved 54.3 1.23e-6   NR KAI9141380.1 1500003 g31575 i0 52.4 1.92613636363636 42 20 71.6 0 13 138 226 267 KAI9141380.1 hypothetical protein BKA69DRAFT_1038505 [Paraphysoderma sedebokerense] diamond 339 54.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29049823 29049823 PRJNA278119_P_NODE_29308_length_183_cov_1.164179_g29059_i0 PRJNA278119 29308 183 1.164179 2.13044757 Opisthokonta 33154 Fungi Fungi 65.9 1.3e-11   NR KAI9216354.1 64508 g29059 i0 65.9 6.95081967213115 44 15 72.1 0 48 179 4 47 KAI9216354.1 ribosomal protein L34e-domain-containing protein [Blastocladiella britannica] diamond 1272 66.2 0.995468277945619 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
29537147 29537147 PRJNA278119_P_NODE_28110_length_187_cov_1.043478_g27861_i0 PRJNA278119 28110 187 1.043478 1.95130386 Blastocladiella britannica 64508 Fungi Fungi 65.1 1.77e-11   NR KAI9221742.1 64508 g27861 i0 65.1 0.689839572192513 43 15 69 0 182 54 60 102 KAI9221742.1 profilin [Blastocladiella britannica] diamond 129 65.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
32129073 32129073 PRJNA278119_P_NODE_30498_length_179_cov_1.600000_g30249_i0 PRJNA278119 30498 179 1.6 2.864 Catenaria anguillulae PL171 765915 Fungi Fungi 65.9 1.1e-10   NR ORZ41168.1 765915 g30249 i0 69.8 1.4413407821229 43 13 72.1 0 50 178 9 51 ORZ41168.1 peptidase M24, structural domain-containing protein [Catenaria anguillulae PL171] diamond 258 65.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32778223 32778223 PRJNA278119_P_NODE_31220_length_177_cov_1.835938_g30971_i0 PRJNA278119 31220 177 1.835938 3.24961026 Opisthokonta 33154 Fungi Fungi 70.1 9.37e-14   NR KNE66705.1 578462 g30971 i0 72.5 3.47457627118644 51 14 86.4 0 159 7 1 51 KNE66705.1 60S acidic ribosomal protein P2 [Allomyces macrogynus ATCC 38327] diamond 615 70.5 0.994326241134752 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;