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contig_metadata

32 rows where bioproject = "PRJNA278119" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 32 ✖

bioproject 1

  • PRJNA278119 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646308 1646308 PRJNA278119_P_NODE_4822_length_547_cov_1.244980_g4578_i0 PRJNA278119 4822 547 1.24498 6.8100406 root 1 Root_unresolved Root_unresolved 134 1.38e-33   NR CAG9461133.1 765719 g4578 i0 76.3 5.08409506398537 80 18 43.9 1 255 494 100 178 CAG9461133.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 2781 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
5474699 5474699 PRJNA278119_P_NODE_31325_length_177_cov_1.453125_g31076_i0 PRJNA278119 31325 177 1.453125 2.57203125 Monoraphidium minutum 39955 Plants Plants 109 1.3600000000000002e-26   NR KAI8464841.1 39955 g31076 i0 77.6 1.96610169491525 58 13 98.3 0 3 176 36 93 KAI8464841.1 MAG: P-loop containing nucleoside triphosphate hydrolase protein [Monoraphidium minutum] diamond 348 109 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
5474937 5474937 PRJNA278119_P_NODE_6105_length_482_cov_5.318707_g5859_i0 PRJNA278119 6105 482 5.318707 25.63616774 Haematococcus lacustris 44745 Plants Plants 84 3.82e-16   NR KAJ9529013.1 44745 g5859 i0 53.2 0.983402489626556 79 37 49.2 0 411 175 170 248 KAJ9529013.1 hypothetical protein QJQ45_007086 [Haematococcus lacustris] diamond 474 84 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
7436661 7436661 PRJNA278119_P_NODE_18346_length_238_cov_1.375661_g18097_i0 PRJNA278119 18346 238 1.375661 3.27407318 Eukaryota 2759 Plants Plants 58.4 4.59e-4   NTclustered gi|302841517|ref|XM_002952258.1| 3068 g18097 i0 94.595 9.84033613445378 37 2 16 0 118 154 912 876 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_92929), partial mRNA blastn 2342 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
9299167 9299167 PRJNA278119_P_NODE_1548_length_982_cov_2.976420_g1123_i1 PRJNA278119 1548 982 2.97642 29.2284444 Trebouxiophyceae 75966 Plants Plants 313 9.77e-103   NR KAK9814439.1 41462 g1123 i1 64.1 5.74032586558045 237 84 72.1 1 801 94 22 258 KAK9814439.1 hypothetical protein WJX72_005897 [[Myrmecia] bisecta] diamond 5637 313 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
10575076 10575076 PRJNA278119_P_NODE_16649_length_258_cov_0.995215_g16400_i0 PRJNA278119 16649 258 0.995215 2.5676547 Auxenochlorella protothecoides 3075 Plants Plants 149 1.55e-39   NR RMZ52643.1 3075 g16400 i0 89.4 5.93023255813953 85 9 98.8 0 257 3 53 137 RMZ52643.1 hypothetical protein APUTEX25_000762, partial [Auxenochlorella protothecoides] diamond 1530 149 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
13124825 13124825 PRJNA278119_P_NODE_1071_length_1170_cov_4.826048_g918_i0 PRJNA278119 1071 1170 4.826048 56.4647616 Eukaryota 2759 Plants Plants 302 3.7899999999999984e-96   NR WIA40358.1 3088 g918 i0 52.2 11.8384615384615 312 143 78.7 5 1092 172 80 390 WIA40358.1 hypothetical protein OEZ86_013722 [Tetradesmus obliquus] diamond 13851 302 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
13125001 13125001 PRJNA278119_P_NODE_22431_length_209_cov_1.300000_g22182_i0 PRJNA278119 22431 209 1.3 2.717 Chlorophyta 3041 Plants Plants 79.7 4.43e-17   NR XP_011398628.1 3075 g22182 i0 60 1.73684210526316 65 26 93.3 0 204 10 66 130 XP_011398628.1 40S ribosomal protein S17 [Auxenochlorella protothecoides] diamond 363 79.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
14400365 14400365 PRJNA278119_P_NODE_36632_length_168_cov_0.873950_g36383_i0 PRJNA278119 36632 168 0.87395 1.468236 Dunaliella viridis 140095 Plants Plants 63.9 6.52e-6   NTclustered gi|772311199|ref|NC_026571.1| 140095 g36383 i0 100 0.380952380952381 34 0 20 0 1 34 8886 8919 Dunaliella viridis strain CCM-UDEC 002 mitochondrion, complete genome blastn 64 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
15673844 15673844 PRJNA278119_P_NODE_19953_length_224_cov_1.325714_g19704_i0 PRJNA278119 19953 224 1.325714 2.96959936 Chlamydomonas eustigma 1157962 Plants Plants 125 3.28e-33   NR GAX80767.1 1157962 g19704 i0 81.1 0.991071428571429 74 14 99.1 0 223 2 22 95 GAX80767.1 hypothetical protein CEUSTIGMA_g8202.t1 [Chlamydomonas eustigma] diamond 222 125 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
15674294 15674294 PRJNA278119_P_NODE_8073_length_417_cov_2.796196_g7826_i0 PRJNA278119 8073 417 2.796196 11.66013732 Coccomyxa subellipsoidea C-169 574566 Plants Plants 174 4.36e-53   NR XP_005648694.1 574566 g7826 i0 66.1 5.48920863309352 127 41 91.4 1 35 415 1 125 XP_005648694.1 ribosomal protein L27a component of cytosolic 80S ribosome and 60S large subunit [Coccomyxa subellipsoidea C-169] diamond 2289 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
16948815 16948815 PRJNA278119_P_NODE_3974_length_605_cov_1.967626_g3735_i0 PRJNA278119 3974 605 1.967626 11.9041373 Helicosporidium sp. ATCC 5 1907511 Plants Plants 239 7.23e-76   NR KDD76608.1 1291522 g3735 i0 54 4.42809917355372 224 69 96.2 2 22 603 1 220 KDD76608.1 ribosomal L18p/L5e [Helicosporidium sp. ATCC 50920] diamond 2679 239 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
18223217 18223217 PRJNA278119_P_NODE_4995_length_535_cov_5.862140_g4751_i0 PRJNA278119 4995 535 5.86214 31.362449 Eukaryota 2759 Plants Plants 103 6.86e-25   NR KAK2080961.1 3111 g4751 i0 54.2 3.28598130841121 118 54 66.2 0 501 148 6 123 KAK2080961.1 60S ribosomal protein L35-4 [Prototheca wickerhamii] diamond 1758 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
24597173 24597173 PRJNA278119_P_NODE_14480_length_288_cov_0.983264_g14231_i0 PRJNA278119 14480 288 0.983264 2.83180032 Binuclearia lauterbornii 3087189 Plants Plants 80.5 1.22e-10   NTclustered gi|2724824417|gb|PP746559.1| 3087189 g14231 i0 85.366 0.847222222222222 82 7 27 4 60 138 273 194 Binuclearia lauterbornii culture SAG:68.94 mitochondrion, complete genome blastn 244 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Oocystaceae Binuclearia Binuclearia lauterbornii
24597722 24597722 PRJNA278119_P_NODE_8540_length_405_cov_1.328652_g8293_i0 PRJNA278119 8540 405 1.328652 5.3810406 Eukaryota 2759 Plants Plants 184 1.23e-57   NR PRW20625.1 3076 g8293 i0 84.8 24.5407407407407 105 16 77.8 0 37 351 1 105 PRW20625.1 60S ribosomal L30 [Chlorella sorokiniana] diamond 9939 185 0.994594594594595 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
26598931 26598931 PRJNA278119_P_NODE_20561_length_220_cov_1.216374_g20312_i0 PRJNA278119 20561 220 1.216374 2.6760228 Volvox reticuliferus 1737510 Plants Plants 48.1 3.47e-4   NR GIL80940.1 1737510 g20312 i0 44.6 1.65 65 31 87.3 3 216 25 410 470 GIL80940.1 hypothetical protein Vretifemale_10081 [Volvox reticuliferus] diamond 363 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
27091825 27091825 PRJNA278119_P_NODE_29982_length_181_cov_1.181818_g29733_i0 PRJNA278119 29982 181 1.181818 2.13909058 Eukaryota 2759 Plants Plants 55.5 5.25e-7   NR XP_002958684.1 3068 g29733 i0 58.5 1.60773480662983 41 17 68 0 174 52 346 386 XP_002958684.1 uncharacterized protein VOLCADRAFT_108254 [Volvox carteri f. nagariensis] diamond 291 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
27674520 27674520 PRJNA278119_P_NODE_16544_length_259_cov_1.461905_g16295_i0 PRJNA278119 16544 259 1.461905 3.78633395 Tetradesmus obliquus 3088 Plants Plants 97.1 1.53e-23   NR WIA40893.1 3088 g16295 i0 50 2.53667953667954 112 15 82.2 1 22 234 28 139 WIA40893.1 hypothetical protein OEZ86_004555 [Tetradesmus obliquus] diamond 657 97.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28368860 28368860 PRJNA278119_P_NODE_33406_length_172_cov_1.170732_g33157_i0 PRJNA278119 33406 172 1.170732 2.01365904 Tetrabaena socialis 47790 Plants Plants 77.4 8.27e-15   NR PNH09923.1 47790 g33157 i0 65.4 4.32558139534884 52 18 90.7 0 9 164 218 269 PNH09923.1 ADP-ribosylation factor [Tetrabaena socialis] diamond 744 77.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
28842420 28842420 PRJNA278119_P_NODE_5768_length_496_cov_4.897092_g5522_i0 PRJNA278119 5768 496 4.897092 24.28957632 Picochlorum sp. BPE23 2696299 Plants Plants 142 2.34e-40   NR KAI8104783.1 2696299 g5522 i0 65.6 3 122 42 73.8 0 474 109 1 122 KAI8104783.1 hypothetical protein M9434_003335 [Picochlorum sp. BPE23] diamond 1488 142 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
28968958 28968958 PRJNA278119_P_NODE_31208_length_177_cov_1.992188_g30959_i0 PRJNA278119 31208 177 1.992188 3.52617276 Prototheca wickerhamii 3111 Plants Plants 54.3 1.26e-6   NR KAK2079109.1 3111 g30959 i0 46.6 3.4406779661017 58 31 98.3 0 2 175 506 563 KAK2079109.1 hypothetical protein QBZ16_002799 [Prototheca wickerhamii] diamond 609 54.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29095299 29095299 PRJNA278119_P_NODE_7428_length_436_cov_1.829457_g7181_i0 PRJNA278119 7428 436 1.8294570000000001 7.97643252 Coccomyxa sp. Obi 2315456 Plants Plants 64.7 6.93e-9   NR BDA51182.1 2315456 g7181 i0 30.2 1.02522935779817 149 80 99.8 4 2 436 170 298 BDA51182.1 Xanthine dehydrogenase [Coccomyxa sp. Obi] diamond 447 64.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
29410764 29410764 PRJNA278119_P_NODE_12269_length_325_cov_4.826087_g12021_i0 PRJNA278119 12269 325 4.826087 15.68478275 Ulva partita 1605170 Plants Plants 109 1.47e-28   NR BAV58192.1 1605170 g12021 i0 74.6 0.618461538461539 67 17 61.8 0 19 219 42 108 BAV58192.1 H/ACA ribonucleoprotein complex subunit 3 [Ulva partita] diamond 201 109 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva partita
29586150 29586150 PRJNA278119_P_NODE_35710_length_169_cov_0.866667_g35461_i0 PRJNA278119 35710 169 0.866667 1.46466723 Chlamydomonadales 3042 Plants Plants 51.2 1.32e-5   NR XP_002950817.1 3068 g35461 i0 44.6 4.86390532544379 56 30 97.6 1 166 2 34 89 XP_002950817.1 eukaryotic translation initiation factor 3f [Volvox carteri f. nagariensis] diamond 822 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
29947771 29947771 PRJNA278119_P_NODE_24231_length_201_cov_1.026316_g23982_i0 PRJNA278119 24231 201 1.026316 2.06289516 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 44.7 0.00429   NR KAF6257886.1 2650976 g23982 i0 43.8 0.716417910447761 48 27 71.6 0 181 38 29 76 KAF6257886.1 hypothetical protein COO60DRAFT_1175084 [Scenedesmus sp. NREL 46B-D3] diamond 144 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
29947780 29947780 PRJNA278119_P_NODE_30291_length_180_cov_1.190840_g30042_i0 PRJNA278119 30291 180 1.19084 2.143512 Chlamydomonas eustigma 1157962 Plants Plants 56.2 2.56e-7   NR GAX78233.1 1157962 g30042 i0 43.3 1 60 34 100 0 180 1 117 176 GAX78233.1 hypothetical protein CEUSTIGMA_g5675.t1 [Chlamydomonas eustigma] diamond 180 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
31324027 31324027 PRJNA278119_P_NODE_43995_length_164_cov_0.904348_g43746_i0 PRJNA278119 43995 164 0.904348 1.48313072 Eukaryota 2759 Plants Plants 48.9 8.49e-5   NR WIA15979.1 3088 g43746 i0 51 5.17682926829268 49 23 89.6 1 2 148 498 545 WIA15979.1 hypothetical protein OEZ85_012719 [Tetradesmus obliquus] diamond 849 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
31324030 31324030 PRJNA278119_P_NODE_9475_length_381_cov_1.822289_g9228_i0 PRJNA278119 9475 381 1.822289 6.94292109 Chlorellaceae 35461 Plants Plants 57 6.66e-8   NR KAI3431640.1 3077 g9228 i0 37.8 2.02362204724409 82 44 64.6 2 325 80 1 75 KAI3431640.1 hypothetical protein D9Q98_004687 [Chlorella vulgaris] diamond 771 57 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
31970620 31970620 PRJNA278119_P_NODE_14658_length_285_cov_1.394068_g14409_i0 PRJNA278119 14658 285 1.394068 3.9730938 Chlamydomonas eustigma 1157962 Plants Plants 147 1.5e-41   NR GAX80767.1 1157962 g14409 i0 73.9 0.968421052631579 92 24 96.8 0 283 8 163 254 GAX80767.1 hypothetical protein CEUSTIGMA_g8202.t1 [Chlamydomonas eustigma] diamond 276 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
32572047 32572047 PRJNA278119_P_NODE_25099_length_197_cov_1.594595_g24850_i0 PRJNA278119 25099 197 1.594595 3.14135215 Auxenochlorella protothecoides 3075 Plants Plants 93.6 5.07e-22   NR XP_011396696.1 3075 g24850 i0 73.8 7.65989847715736 65 17 99 0 1 195 97 161 XP_011396696.1 60S ribosomal protein L18-3 [Auxenochlorella protothecoides] diamond 1509 93.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
32697623 32697623 PRJNA278119_P_NODE_10200_length_366_cov_1.211356_g9953_i0 PRJNA278119 10200 366 1.211356 4.43356296 Chlamydomonas eustigma 1157962 Plants Plants 115 1.79e-27   NR GAX77342.1 1157962 g9953 i0 49.2 1 122 57 100 1 366 1 109 225 GAX77342.1 hypothetical protein CEUSTIGMA_g4788.t1 [Chlamydomonas eustigma] diamond 366 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
32841226 32841226 PRJNA278119_P_NODE_23640_length_203_cov_1.532468_g23391_i0 PRJNA278119 23640 203 1.532468 3.11091004 root 1 Root_unresolved Root_unresolved 46.2 0.00129   NR KAK9803625.1 41462 g23391 i0 48.8 2.00985221674877 41 21 60.6 0 154 32 142 182 KAK9803625.1 hypothetical protein WJX72_006770 [[Myrmecia] bisecta] diamond 408 46.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;