RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA278119" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA278119 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27502744 27502744 PRJNA278119_P_NODE_34883_length_169_cov_0.866667_g34634_i0 PRJNA278119 34883 169 0.866667 1.46466723 root 1 Root_unresolved Root_unresolved 48.9 8.76e-5   NR WP_188148798.1 2251 g34634 i0 41.5 5.73372781065089 53 31 94.1 0 161 3 67 119 WP_188148798.1 MULTISPECIES: vWA domain-containing protein [Haloferax] diamond 969 49.3 0.991886409736308 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax  
30295666 30295666 PRJNA278119_P_NODE_24332_length_200_cov_1.509934_g24083_i0 PRJNA278119 24332 200 1.509934 3.019868 Methanosarcina sp. 2213 Archaea Archaea 72.8 4.33e-13   NR HET8689160.1 2213 g24083 i0 53 1.98 66 31 99 0 199 2 52 117 HET8689160.1 ribonucleotide-diphosphate reductase subunit beta [Methanosarcina sp.] diamond 396 72.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31260883 31260883 PRJNA278119_P_NODE_45295_length_163_cov_0.912281_g45046_i0 PRJNA278119 45295 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 45.4 0.00141   NR HII81021.1 2213 g45046 i0 40.8 1.63803680981595 49 29 90.2 0 163 17 297 345 HII81021.1 ParA family protein [Methanosarcina sp.] diamond 267 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;