RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA278119", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA278119 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16948830 16948830 PRJNA278119_P_NODE_41014_length_165_cov_1.543103_g40765_i0 PRJNA278119 41014 165 1.543103 2.54611995 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 94 2.26e-22   NR ETO03070.1 46433 g40765 i0 87 1.96363636363636 54 7 98.2 0 163 2 80 133 ETO03070.1 hypothetical protein RFI_34341 [Reticulomyxa filosa] diamond 324 94 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32255854 32255854 PRJNA278119_P_NODE_4618_length_559_cov_2.092157_g4375_i0 PRJNA278119 4618 559 2.092157 11.69515763 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 129 9.959999999999996e-35   NR ETO06965.1 46433 g4375 i0 54.4 0.552772808586762 103 46 54.7 1 549 244 45 147 ETO06965.1 hypothetical protein RFI_30425 [Reticulomyxa filosa] diamond 309 129 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32855102 32855102 PRJNA278119_P_NODE_32300_length_174_cov_2.080000_g32051_i0 PRJNA278119 32300 174 2.08 3.6192 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 78.2 4.71e-15   NR ETO16913.1 46433 g32051 i0 66.7 0.982758620689655 57 19 98.3 0 174 4 132 188 ETO16913.1 hypothetical protein RFI_20425, partial [Reticulomyxa filosa] diamond 171 78.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;