RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA278119", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA278119 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28432127 28432127 PRJNA278119_P_NODE_14386_length_289_cov_2.158333_g14137_i0 PRJNA278119 14386 289 2.158333 6.23758237 Pontiella sulfatireligans 2750658 Bacteria Bacteria 54.7 4.19e-6   NR WP_136060505.1 2750658 g14137 i0 50 1.22491349480969 66 25 67.5 3 208 14 125 183 WP_136060505.1 amidohydrolase family protein [Pontiella sulfatireligans] diamond 354 54.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae Pontiella Pontiella sulfatireligans
29252783 29252783 PRJNA278119_P_NODE_47329_length_162_cov_0.920354_g47080_i0 PRJNA278119 47329 162 0.920354 1.49097348 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.9 0.00476   NR MBQ6009652.1 2212473 g47080 i0 51.1 1.64814814814815 45 9 83.3 1 160 26 320 351 MBQ6009652.1 galactose mutarotase [Kiritimatiellia bacterium] diamond 267 43.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;