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contig_metadata

26 rows where bioproject = "PRJNA278119", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 26 ✖

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA278119 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6749270 6749270 PRJNA278119_P_NODE_7746_length_427_cov_3.846561_g7499_i0 PRJNA278119 7746 427 3.846561 16.42481547 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 217 1.38e-51   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g7499 i0 80.208 57.3395784543326 288 57 67 0 2 289 408 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 24484 217 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8024824 8024824 PRJNA278119_P_NODE_48267_length_152_cov_2.388350_g48018_i0 PRJNA278119 48267 152 2.38835 3.630292 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 132 1.5500000000000002e-26   NTclustered gi|470437344|ref|XM_004338929.1| 1257118 g48018 i0 83.221 4.79605263157895 149 19 96 6 1 146 202 347 Acanthamoeba castellanii str. Neff chaperonin GroL, putative (ACA1_128510), partial mRNA blastn 729 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9299562 9299562 PRJNA278119_P_NODE_44428_length_163_cov_1.780702_g44179_i0 PRJNA278119 44428 163 1.780702 2.90254426 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 63.9 6.28e-6   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g44179 i0 97.297 0.398773006134969 37 1 23 0 2 38 488 452 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 65 63.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10575457 10575457 PRJNA278119_P_NODE_46209_length_162_cov_1.592920_g45960_i0 PRJNA278119 46209 162 1.59292 2.5805304 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 289 9.44e-74   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g45960 i0 98.765 7.90740740740741 162 2 100 0 1 162 142 303 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 1281 289 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
10575554 10575554 PRJNA278119_P_NODE_829_length_1304_cov_2.759363_g695_i0 PRJNA278119 829 1304 2.759363 35.98209352 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 452 4.84e-154   NR ACO50132.1 308475 g695 i0 70.1 4.29294478527607 311 93 71.5 0 11 943 89 399 ACO50132.1 elongation factor 1 alpha, partial [Paramoeba branchiphila] diamond 5598 452 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
16948960 16948960 PRJNA278119_P_NODE_7734_length_428_cov_1.327177_g7487_i0 PRJNA278119 7734 428 1.327177 5.68031756 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 127 1.02e-33   NR XP_004337603.1 1257118 g7487 i0 61.3 3.32943925233645 106 40 74.3 1 320 3 84 188 XP_004337603.1 ribosomal protein L23, putative [Acanthamoeba castellanii str. Neff] diamond 1425 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18222945 18222945 PRJNA278119_P_NODE_27535_length_188_cov_2.028777_g27286_i0 PRJNA278119 27535 188 2.028777 3.81410076 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 331 1.85e-86   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g27286 i0 98.404 96.0053191489362 188 3 100 0 1 188 565 378 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 18049 331 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
20772887 20772887 PRJNA278119_P_NODE_40117_length_166_cov_0.888889_g39868_i0 PRJNA278119 40117 166 0.888889 1.47555574 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 241 2.76e-59   NTclustered gi|300078498|gb|GU001160.1| 5755 g39868 i0 92.857 1.01204819277108 168 8 99 3 3 166 5758 5925 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 168 241 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21460670 21460670 PRJNA278119_P_NODE_7837_length_424_cov_3.437333_g7590_i0 PRJNA278119 7837 424 3.437333 14.57429192 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 239 1.89e-76   NR XP_004338972.1 1257118 g7590 i0 87.2 0.941037735849057 133 17 94.1 0 401 3 6 138 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 399 239 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22047584 22047584 PRJNA278119_P_NODE_16158_length_264_cov_1.190698_g15909_i0 PRJNA278119 16158 264 1.190698 3.14344272 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 119 3.71e-30   NR XP_004335426.1 1257118 g15909 i0 66.7 0.954545454545455 84 28 95.5 0 253 2 130 213 XP_004335426.1 cathepsin L, putative [Acanthamoeba castellanii str. Neff] diamond 252 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23323560 23323560 PRJNA278119_P_NODE_5319_length_517_cov_1.495726_g5075_i0 PRJNA278119 5319 517 1.4957260000000001 7.73290342 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 4.26e-38   NR XP_004368153.1 1257118 g5075 i0 65.4 2.91295938104449 104 33 58.6 1 338 36 58 161 XP_004368153.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] diamond 1506 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24597432 24597432 PRJNA278119_P_NODE_3160_length_682_cov_2.034755_g2927_i0 PRJNA278119 3160 682 2.034755 13.8770291 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.28e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g2927 i0 79.235 67.7683284457478 549 104 80 8 6 549 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46218 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25285015 25285015 PRJNA278119_P_NODE_7240_length_442_cov_2.030534_g6993_i0 PRJNA278119 7240 442 2.030534 8.97496028 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 103 1.86e-25   NR 1F2K_A 5755 g6993 i0 75.8 0.447963800904977 66 16 44.8 0 178 375 60 125 1F2K_A Chain A, PROFILIN II [Acanthamoeba castellanii] diamond 198 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27484916 27484916 PRJNA278119_P_NODE_43883_length_164_cov_0.904348_g43634_i0 PRJNA278119 43883 164 0.904348 1.48313072 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89 4.32e-19   NR XP_004334790.1 1257118 g43634 i0 75.9 1.97560975609756 54 13 98.8 0 162 1 145 198 XP_004334790.1 tryptophan-tRNA ligase [Acanthamoeba castellanii str. Neff] diamond 324 89 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28463816 28463816 PRJNA278119_P_NODE_21926_length_212_cov_0.907975_g21677_i0 PRJNA278119 21926 212 0.907975 1.924907 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 94 5.83e-22   NR XP_004333640.1 1257118 g21677 i0 77.6 4.13207547169811 58 13 82.1 0 210 37 55 112 XP_004333640.1 peroxiredoxin 2, putative [Acanthamoeba castellanii str. Neff] diamond 876 94 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28653189 28653189 PRJNA278119_P_NODE_8467_length_407_cov_1.150838_g8220_i0 PRJNA278119 8467 407 1.150838 4.68391066 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 146 1.07e-42   NR XP_004345964.1 1257118 g8220 i0 60.6 3.23587223587224 109 42 80.3 1 29 355 1 108 XP_004345964.1 Peptidylprolyl isomerase FKBP12, putative [Acanthamoeba castellanii str. Neff] diamond 1317 146 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29316164 29316164 PRJNA278119_P_NODE_36209_length_168_cov_1.310924_g35960_i0 PRJNA278119 36209 168 1.310924 2.20235232 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84 8.41e-18   NR XP_004333661.1 1257118 g35960 i0 67.3 0.982142857142857 55 18 98.2 0 167 3 60 114 XP_004333661.1 actin bundling protein [Acanthamoeba castellanii str. Neff] diamond 165 84 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29442217 29442217 PRJNA278119_P_NODE_36150_length_168_cov_1.310924_g35901_i0 PRJNA278119 36150 168 1.310924 2.20235232 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.3 1.83e-8   NR XP_004335436.1 1257118 g35901 i0 49.1 1.96428571428571 55 27 96.4 1 5 166 10 64 XP_004335436.1 uncharacterized protein ACA1_244530 [Acanthamoeba castellanii str. Neff] diamond 330 59.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29758097 29758097 PRJNA278119_P_NODE_3391_length_658_cov_32.949097_g3156_i0 PRJNA278119 3391 658 32.949097 216.80505826 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.8 0.00191   NR XP_004351526.1 1257118 g3156 i0 46.9 0.223404255319149 49 26 22.3 0 63 209 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 47.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29838984 29838984 PRJNA278119_P_NODE_11411_length_341_cov_2.291096_g11163_i0 PRJNA278119 11411 341 2.291096 7.81263736 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 72.4 4.35e-12   NR BBN23851.1 5755 g11163 i0 68.2 0.774193548387097 44 14 38.7 0 208 339 47 90 BBN23851.1 serine protease precursor, partial [Acanthamoeba castellanii] diamond 264 72.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29853024 29853024 PRJNA278119_P_NODE_36751_length_168_cov_0.873950_g36502_i0 PRJNA278119 36751 168 0.87395 1.468236 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.3 6.64e-15   NR XP_004367664.1 1257118 g36502 i0 61.5 0.928571428571429 52 19 91.1 1 155 3 102 153 XP_004367664.1 phytanoylCoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 156 76.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29853031 29853031 PRJNA278119_P_NODE_4291_length_580_cov_2.512241_g4049_i0 PRJNA278119 4291 580 2.512241 14.5709978 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 123 1.9299999999999995e-31   NR XP_004338683.1 1257118 g4049 i0 42.1 0.687931034482759 133 76 68.8 1 174 572 76 207 XP_004338683.1 uncharacterized protein ACA1_089180 [Acanthamoeba castellanii str. Neff] diamond 399 123 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30232044 30232044 PRJNA278119_P_NODE_43272_length_164_cov_0.904348_g43023_i0 PRJNA278119 43272 164 0.904348 1.48313072 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.7 3.84e-18   NR XP_004334520.1 1257118 g43023 i0 77.4 1.9390243902439 53 12 97 0 159 1 295 347 XP_004334520.1 CMF receptor CMFR1, putative [Acanthamoeba castellanii str. Neff] diamond 318 86.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31306340 31306340 PRJNA278119_P_NODE_4095_length_595_cov_2.073260_g3855_i0 PRJNA278119 4095 595 2.07326 12.335897 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 143 2.54e-39   NR XP_004333244.1 1257118 g3855 i0 44.1 0.811764705882353 161 89 80.7 1 40 519 14 174 XP_004333244.1 MAPEG family protein [Acanthamoeba castellanii str. Neff] diamond 483 143 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31387562 31387562 PRJNA278119_P_NODE_39856_length_166_cov_0.888889_g39607_i0 PRJNA278119 39856 166 0.888889 1.47555574 root 1 Root_unresolved Root_unresolved 49.3 6.3e-5   NR XP_004341750.1 1257118 g39607 i0 50.9 2.53012048192771 53 25 95.8 1 165 7 110 161 XP_004341750.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 420 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32192240 32192240 PRJNA278119_P_NODE_2138_length_841_cov_1.652778_g1931_i0 PRJNA278119 2138 841 1.652778 13.89986298 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 149 2.0199999999999998e-38   NR XP_004338577.1 1257118 g1931 i0 40.2 0.859690844233056 241 110 78.1 5 833 177 126 354 XP_004338577.1 peptidase [Acanthamoeba castellanii str. Neff] diamond 723 149 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;