RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA274362" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1645367 1645367 PRJNA274362_S_NODE_23802_length_192_cov_1.125874_g23682_i0 PRJNA274362 23802 192 1.125874 2.16167808 Paratrimastix eleionoma 1709329 Preaxostyla other_Eukaryota 71.2 1.7e-13   NR WCZ58425.1 1709329 g23682 i0 54 3.9375 63 29 98.4 0 2 190 94 156 WCZ58425.1 60S ribosomal protein L13a [Paratrimastix eleionoma] diamond 756 71.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma
26757404 26757404 PRJNA274362_S_NODE_12321_length_252_cov_1.931034_g12201_i0 PRJNA274362 12321 252 1.931034 4.86620568 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 64.7 4.22e-10   NR KAJ4454597.1 342808 g12201 i0 43.5 0.821428571428571 69 39 82.1 0 211 5 18 86 KAJ4454597.1 putative actin binding protein [Paratrimastix pyriformis] diamond 207 64.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;