RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA274362" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11849222 11849222 PRJNA274362_S_NODE_25030_length_188_cov_1.474820_g24910_i0 PRJNA274362 25030 188 1.47482 2.7726616 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 148 2e-31   NTclustered gi|294879533|ref|XM_002768668.1| 423536 g24910 i0 80.952 11.0691489361702 189 34 100 2 1 188 302 489 Perkinsus marinus ATCC 50983 elongation factor Tu, putative, mRNA blastn 2081 148 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
29410760 29410760 PRJNA274362_S_NODE_33469_length_167_cov_0.881356_g33349_i0 PRJNA274362 33469 167 0.881356 1.47186452 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 55.1 5.86e-7   NR KAF4711357.1 32597 g33349 i0 76.7 3.77245508982036 30 7 53.9 0 4 93 301 330 KAF4711357.1 hypothetical protein FOZ63_028272, partial [Perkinsus olseni] diamond 630 55.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;