RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA274362" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA274362 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27611282 27611282 PRJNA274362_S_NODE_6124_length_342_cov_1.228669_g6004_i0 PRJNA274362 6124 342 1.228669 4.20204798 Rozella allomycis CSF55 988480 Fungi Fungi 143 2.29e-41   NR EPZ31907.1 988480 g6004 i0 65.8 4.83333333333333 111 37 97.4 1 340 8 15 124 EPZ31907.1 60S ribosomal protein L26-2 [Rozella allomycis CSF55] diamond 1653 143 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28937357 28937357 PRJNA274362_S_NODE_24848_length_189_cov_1.085714_g24728_i0 PRJNA274362 24848 189 1.085714 2.05199946 Rozella allomycis CSF55 988480 Fungi Fungi 78.6 9.45e-17   NR EPZ31907.1 988480 g24728 i0 60.3 3.01587301587302 63 24 98.4 1 2 187 36 98 EPZ31907.1 60S ribosomal protein L26-2 [Rozella allomycis CSF55] diamond 570 78.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;