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contig_metadata

18 rows where bioproject = "PRJNA274362", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 18 ✖

tax_kingdom 1

  • Metazoa · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2921304 2921304 PRJNA274362_S_NODE_28143_length_178_cov_6.023256_g28023_i0 PRJNA274362 28143 178 6.023256 10.72139568 Apostichopus californicus 2032702 Echinodermata other_Eukaryota 316 4.8399999999999983e-82   NTclustered gi|110826348|gb|DQ777087.1| 2032702 g28023 i0 98.876 26.3426966292135 178 1 100 1 1 178 313 137 Parastichopus californicus voucher AMCC 113282 28S ribosomal RNA gene, partial sequence blastn 4689 316 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus californicus
5473930 5473930 PRJNA274362_S_NODE_2365_length_528_cov_7.693111_g2248_i0 PRJNA274362 2365 528 7.693111 40.61962608 Psychropotes longicauda 55639 Echinodermata other_Eukaryota 130 2.33e-25   NTclustered gi|2370359|emb|Z80946.1| 55639 g2248 i0 78.469 9.30681818181818 209 38 39 7 1 206 351 555 P.longicauda partial 28S rRNA gene blastn 4914 130 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Elasipodida Psychropotidae Psychropotes Psychropotes longicauda
6748436 6748436 PRJNA274362_S_NODE_32506_length_168_cov_1.310924_g32386_i0 PRJNA274362 32506 168 1.310924 2.20235232 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.014   NTclustered gi|1826622945|ref|XR_004444679.1| 1529436 g32386 i0 100 0.166666666666667 28 0 17 0 76 103 553 526 PREDICTED: Anneissia japonica uncharacterized LOC117103909 (LOC117103909), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
6748586 6748586 PRJNA274362_S_NODE_5846_length_348_cov_9.096990_g5726_i0 PRJNA274362 5846 348 9.09699 31.6575252 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 638 1.99e-178   NTclustered gi|329790855|dbj|AB595140.1| 307972 g5726 i0 99.713 97.1781609195402 348 1 100 0 1 348 365 18 Apostichopus japonicus gene for 18S rRNA, partial sequence blastn 33818 638 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
7436520 7436520 PRJNA274362_S_NODE_27126_length_181_cov_10.022727_g27006_i0 PRJNA274362 27126 181 10.022727 18.14113587 Echinoidea 7625 Echinodermata other_Eukaryota 213 6.66e-51   NTclustered gi|15208480|gb|AY026367.1| 7641 g27006 i0 89.08 96.1602209944751 174 15 96 3 3 176 1811 1980 Arbacia punctulata 28S large subunit ribosomal RNA gene, partial sequence blastn 17405 213 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Arbacioida Arbaciidae Arbacia Arbacia punctulata
8023918 8023918 PRJNA274362_S_NODE_2347_length_530_cov_7.738046_g2230_i0 PRJNA274362 2347 530 7.738046 41.0116438 Diplodontias miliaris 992819 Echinodermata other_Eukaryota 368 4.55e-97   NTclustered gi|84043352|gb|DQ297130.1| 992819 g2230 i0 80.074 23.0264150943396 542 70 100 32 1 530 533 18 Asterodon miliaris 28S ribosomal RNA gene, partial sequence blastn 12204 368 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Odontasteridae Diplodontias Diplodontias miliaris
8711309 8711309 PRJNA274362_S_NODE_37007_length_162_cov_9.070796_g36887_i0 PRJNA274362 37007 162 9.070796 14.69468952 Apostichopus 307971 Echinodermata other_Eukaryota 300 4.36e-77   NTclustered gi|329790855|dbj|AB595140.1| 307972 g36887 i0 100 101.018518518519 162 0 100 0 1 162 1482 1643 Apostichopus japonicus gene for 18S rRNA, partial sequence blastn 16365 300 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
11261826 11261826 PRJNA274362_S_NODE_5229_length_365_cov_8.838608_g5109_i0 PRJNA274362 5229 365 8.838608 32.2609192 Apostichopus 307971 Echinodermata other_Eukaryota 675 0   NTclustered gi|329790855|dbj|AB595140.1| 307972 g5109 i0 100 102.523287671233 365 0 100 0 1 365 982 618 Apostichopus japonicus gene for 18S rRNA, partial sequence blastn 37421 675 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
13124381 13124381 PRJNA274362_S_NODE_23031_length_194_cov_4.937931_g22911_i0 PRJNA274362 23031 194 4.937931 9.57958614 Pteraster pulvillus 335715 Echinodermata other_Eukaryota 167 5.7299999999999995e-37   NTclustered gi|82623462|gb|DQ273721.1| 335715 g22911 i0 96.078 99.2371134020619 102 4 53 0 6 107 105 4 Pteraster pulvillus isolate 2 28S ribosomal RNA gene, partial sequence blastn 19252 167 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Velatida Pterasteridae Pteraster Pteraster pulvillus
13124723 13124723 PRJNA274362_S_NODE_5891_length_347_cov_11.912752_g5771_i0 PRJNA274362 5891 347 11.912752 41.33724944 Cucumaria salma 122241 Echinodermata other_Eukaryota 233 1.09e-56   NTclustered gi|11494219|gb|AF212170.1|AF212170 122241 g5771 i0 79.614 34.7636887608069 363 45 100 24 1 347 3036 3385 Cucumaria salma internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12063 233 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Dendrochirotida Cucumariidae Cucumaria Cucumaria salma
15673633 15673633 PRJNA274362_S_NODE_773_length_838_cov_2.569075_g703_i0 PRJNA274362 773 838 2.569075 21.5288485 Metazoa 33208 Echinodermata other_Eukaryota 236 5.81e-71   NR XP_022088858.1 133434 g703 i0 74 27.5727923627685 150 39 53.7 0 1 450 311 460 XP_022088858.1 elongation factor 1-alpha [Acanthaster planci] diamond 23106 236 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
15673653 15673653 PRJNA274362_S_NODE_8833_length_289_cov_7.900000_g8713_i0 PRJNA274362 8833 289 7.9 22.831 Holothuria sanctori 491806 Echinodermata other_Eukaryota 272 1.89e-68   NTclustered gi|1059433196|dbj|LC177083.1| 491806 g8713 i0 84 65.1280276816609 300 31 99 13 1 288 1046 752 Holothuria sanctori mitochondrial gene for 28S ribosomal RNA, partial sequence, isolate: Hsa-16S7 blastn 18822 272 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria sanctori
16947711 16947711 PRJNA274362_S_NODE_12754_length_248_cov_3.743719_g12634_i0 PRJNA274362 12754 248 3.743719 9.28442312 Xyloplax janetae 478272 Echinodermata other_Eukaryota 189 1.6399999999999996e-43   NTclustered gi|87621801|gb|DQ380246.1| 478272 g12634 i0 90.845 40.1209677419355 142 10 57 2 64 205 171 33 Xyloplax janetae voucher FMNH 12460 28S ribosomal RNA gene, partial sequence blastn 9950 189 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Peripodida Xyloplacidae Xyloplax Xyloplax janetae
24596870 24596870 PRJNA274362_S_NODE_3340_length_450_cov_6.605985_g3220_i0 PRJNA274362 3340 450 6.605985 29.7269325 Linckia laevigata 109185 Echinodermata other_Eukaryota 171 1.15e-37   NTclustered gi|1806649380|dbj|LC505033.1| 109185 g3220 i0 87.333 40.8311111111111 150 17 50 2 13 161 7079 7227 Linckia laevigata NSMT:E-12913 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, external transcribed spacer region, partial and complete sequence blastn 18374 171 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Ophidiasteridae Linckia Linckia laevigata
26775454 26775454 PRJNA274362_S_NODE_4961_length_374_cov_2.775385_g4841_i0 PRJNA274362 4961 374 2.775385 10.3799399 Metazoa 33208 Echinodermata other_Eukaryota 149 9.24e-44   NR XP_033632396.1 7604 g4841 i0 67.3 13.2032085561497 113 37 90.6 0 343 5 5 117 XP_033632396.1 60S ribosomal protein L31-like [Asterias rubens] diamond 4938 150 0.993333333333333 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
27832108 27832108 PRJNA274362_S_NODE_1784_length_599_cov_1.923636_g1676_i0 PRJNA274362 1784 599 1.923636 11.52257964 Anneissia japonica 1529436 Echinodermata other_Eukaryota 103 1.1e-22   NR XP_033117238.1 1529436 g1676 i0 83.3 1.14190317195326 54 9 27 0 3 164 240 293 XP_033117238.1 ADP/ATP translocase 1-like [Anneissia japonica] diamond 684 103 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
29554685 29554685 PRJNA274362_S_NODE_16290_length_224_cov_1.382857_g16170_i0 PRJNA274362 16290 224 1.382857 3.09759968 Metazoa 33208 Echinodermata other_Eukaryota 93.6 1.46e-22   NR XP_033641585.1 7604 g16170 i0 69.4 5.31696428571429 72 22 96.4 0 2 217 50 121 XP_033641585.1 40S ribosomal protein S25-like [Asterias rubens] diamond 1191 93.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
32823716 32823716 PRJNA274362_S_NODE_16440_length_223_cov_1.649425_g16320_i0 PRJNA274362 16440 223 1.649425 3.67821775 Asterias rubens 7604 Echinodermata other_Eukaryota 115 3.52e-30   NR XP_033640423.1 7604 g16320 i0 75.7 1.99103139013453 74 18 99.6 0 223 2 56 129 XP_033640423.1 60S ribosomal protein L19-like [Asterias rubens] diamond 444 115 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;