RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA274362", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11849177 11849177 PRJNA274362_S_NODE_22790_length_195_cov_1.808219_g22670_i0 PRJNA274362 22790 195 1.808219 3.52602705 Fungi 4751 Fungi Fungi 85.1 2.67e-19   NR KAJ3373363.1 64504 g22670 i0 68.9 7.36923076923077 61 17 93.8 1 12 194 1 59 KAJ3373363.1 60S ribosomal protein L32 [Allomyces arbusculus] diamond 1437 85.5 0.9953216374269 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
23322919 23322919 PRJNA274362_S_NODE_5959_length_346_cov_1.343434_g5839_i0 PRJNA274362 5959 346 1.343434 4.64828164 Blastocladiomycota 451459 Fungi Fungi 176 4.589999999999999e-54   NR KAI9222637.1 64508 g5839 i0 75.5 7.58670520231214 110 27 95.4 0 334 5 1 110 KAI9222637.1 60S ribosomal protein L21-A [Blastocladiella britannica] diamond 2625 177 0.994350282485876 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27010665 27010665 PRJNA274362_S_NODE_36582_length_163_cov_0.912281_g36462_i0 PRJNA274362 36582 163 0.912281 1.48701803 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 53.9 1.03e-6   NR KAI9182903.1 1313167 g36462 i0 51.9 1.73006134969325 52 21 88.3 1 162 19 184 235 KAI9182903.1 40S ribosomal protein S3 [Blastocladiella emersonii ATCC 22665] diamond 282 53.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
27439707 27439707 PRJNA274362_S_NODE_25343_length_187_cov_1.340580_g25223_i0 PRJNA274362 25343 187 1.34058 2.5068846 Fungi 4751 Fungi Fungi 97.8 1.48e-23   NR KAI9168117.1 1313167 g25223 i0 70.5 4.89304812834225 61 18 97.9 0 183 1 38 98 KAI9168117.1 proteasome core particle subunit beta 3 [Blastocladiella emersonii ATCC 22665] diamond 915 97.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
27579517 27579517 PRJNA274362_S_NODE_24964_length_188_cov_1.870504_g24844_i0 PRJNA274362 24964 188 1.870504 3.51654752 Paraphysoderma sedebokerense 1500003 Fungi Fungi 90.9 6.6500000000000005e-22   NR KAI9142404.1 1500003 g24844 i0 74.1 2.58510638297872 54 14 86.2 0 164 3 4 57 KAI9142404.1 60s ribosomal protein l34-b, partial [Paraphysoderma sedebokerense] diamond 486 90.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
28621646 28621646 PRJNA274362_S_NODE_29007_length_176_cov_1.456693_g28887_i0 PRJNA274362 29007 176 1.456693 2.56377968 Blastocladiella britannica 64508 Fungi Fungi 66.2 5.53e-12   NR KAI9221742.1 64508 g28887 i0 56.4 0.9375 55 24 93.8 0 169 5 58 112 KAI9221742.1 profilin [Blastocladiella britannica] diamond 165 66.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30136871 30136871 PRJNA274362_S_NODE_23232_length_194_cov_1.062069_g23112_i0 PRJNA274362 23232 194 1.062069 2.06041386 Paraphysoderma sedebokerense 1500003 Fungi Fungi 45.1 0.00301   NR KAI9146255.1 1500003 g23112 i0 41.9 0.664948453608247 43 24 64.9 1 69 194 704 746 KAI9146255.1 tudor domain-containing protein [Paraphysoderma sedebokerense] diamond 129 45.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;