RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA274362", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA274362 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2921225 2921225 PRJNA274362_S_NODE_24803_length_189_cov_1.114286_g24683_i0 PRJNA274362 24803 189 1.114286 2.10600054 Anaerolineales bacterium 2073117 Bacteria Bacteria 248 1.93e-61   NTclustered gi|2556899361|gb|CP129481.1| 2073117 g24683 i0 90.576 17.5343915343915 191 13 100 3 1 189 1234086 1233899 MAG: Anaerolineales bacterium isolate cMAG.15 chromosome, complete genome blastn 3314 248 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
16947917 16947917 PRJNA274362_S_NODE_22474_length_196_cov_2.857143_g22354_i0 PRJNA274362 22474 196 2.857143 5.60000028 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 95.3 2.78e-15   NTclustered gi|2874253741|emb|OY969584.1| 1672391 g22354 i0 76.119 36.3979591836735 201 37 99 10 2 195 1349453 1349649 MAG: uncultured Chloroflexia bacterium isolate MFD01299.bin.c.4 genome assembly, chromosome: 1 blastn 7134 95.3 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;