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contig_metadata

16 rows where bioproject = "PRJNA274362" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 16 ✖

bioproject 1

  • PRJNA274362 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370814 370814 PRJNA274362_S_NODE_36021_length_164_cov_0.904348_g35901_i0 PRJNA274362 36021 164 0.904348 1.48313072 Chlamydomonas reinhardtii 3055 Plants Plants 117 4.79e-22   NTclustered gi|2082237132|ref|XM_001689609.2| 3055 g35901 i0 80.667 1.82926829268293 150 29 91 0 13 162 513 662 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g038400v5), mRNA blastn 300 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2921543 2921543 PRJNA274362_S_NODE_5203_length_366_cov_2.451104_g5083_i0 PRJNA274362 5203 366 2.451104 8.97104064 Astrephomene gubernaculifera 47775 Plants Plants 85.9 1.82e-18   NR GFR49314.1 47775 g5083 i0 50 1.68032786885246 104 50 85.2 1 363 52 48 149 GFR49314.1 hypothetical protein Agub_g11337, partial [Astrephomene gubernaculifera] diamond 615 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
5473690 5473690 PRJNA274362_S_NODE_12565_length_250_cov_1.671642_g12445_i0 PRJNA274362 12565 250 1.671642 4.179105 Trebouxia 13786 Plants Plants 136 4.18e-39   NR KAA6423511.1 2608996 g12445 i0 80.5 6.888 82 16 98.4 0 3 248 2 83 KAA6423511.1 MAG: ribosomal component of cytosolic 80S ribosome and 40S small subunit [Trebouxia sp. A1-2] diamond 1722 136 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
5474312 5474312 PRJNA274362_S_NODE_7165_length_319_cov_1.622222_g7045_i0 PRJNA274362 7165 319 1.622222 5.17488818 Prototheca blaschkeae 328666 Plants Plants 300 9.67e-77   NTclustered gi|1159431138|gb|KX389282.1| 328666 g7045 i0 83.81 67.2539184952978 315 51 99 0 5 319 826 512 Prototheca blaschkeae isolate SAG-2064 alpha tubulin (TUA1) mRNA, complete cds blastn 21454 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca blaschkeae
8024233 8024233 PRJNA274362_S_NODE_5527_length_357_cov_2.701299_g5407_i0 PRJNA274362 5527 357 2.701299 9.64363743 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 193 1.91e-44   NTclustered gi|28193497|emb|AJ439528.1| 37502 g5407 i0 77.313 77.0224089635854 335 70 93 5 4 335 584 253 Polytomella sp. 'Pringsheim 198.80' mRNA for 40S ribosomal protein s5 (rs5 gene) blastn 27497 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
12537076 12537076 PRJNA274362_S_NODE_14730_length_234_cov_1.113514_g14610_i0 PRJNA274362 14730 234 1.113514 2.60562276 Eukaryota 2759 Plants Plants 120 1.36e-32   NR KAK2076719.1 3111 g14610 i0 70.5 40.3333333333333 78 21 97.4 1 232 5 76 153 KAK2076719.1 30S ribosomal protein S11, chloroplastic [Prototheca wickerhamii] diamond 9438 120 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
18222370 18222370 PRJNA274362_S_NODE_29095_length_176_cov_1.220472_g28975_i0 PRJNA274362 29095 176 1.220472 2.14803072 Chlorophyta 3041 Plants Plants 90.1 1.2600000000000002e-21   NR CAG9463659.1 765719 g28975 i0 76.4 1.89204545454545 55 13 93.8 0 169 5 4 58 CAG9463659.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 333 90.9 0.991199119911991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
22047446 22047446 PRJNA274362_S_NODE_9038_length_287_cov_1.256303_g8918_i0 PRJNA274362 9038 287 1.256303 3.60558961 Trebouxia sp. C 2796353 Plants Plants 73.6 1.82e-14   NR KAL0042167.1 2905653 g8918 i0 55.4 0.585365853658537 56 25 58.5 0 243 76 5 60 KAL0042167.1 hypothetical protein WJX77_005300 [Trebouxia sp. C0004] diamond 168 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
23322414 23322414 PRJNA274362_S_NODE_16039_length_225_cov_1.994318_g15919_i0 PRJNA274362 16039 225 1.994318 4.4872155 Chlorophyta 3041 Plants Plants 81.6 9.87e-18   NR XP_011398628.1 3075 g15919 i0 59.7 1.66666666666667 67 27 89.3 0 7 207 64 130 XP_011398628.1 40S ribosomal protein S17 [Auxenochlorella protothecoides] diamond 375 81.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
24596544 24596544 PRJNA274362_S_NODE_17280_length_219_cov_0.858824_g17160_i0 PRJNA274362 17280 219 0.858824 1.88082456 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.005   NTclustered gi|2082257431|ref|XM_043067004.1| 3055 g17160 i0 100 0.132420091324201 29 0 13 0 144 172 3514 3486 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g453500v5), mRNA blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
26884380 26884380 PRJNA274362_S_NODE_14801_length_233_cov_1.695652_g14681_i0 PRJNA274362 14801 233 1.695652 3.95086916 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 105 1.32e-25   NR KAF6257032.1 2650976 g14681 i0 70.7 14.4721030042918 75 20 94 1 3 221 60 134 KAF6257032.1 component of cytosolic 80S ribosome and 40S small subunit [Scenedesmus sp. NREL 46B-D3] diamond 3372 105 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
29933996 29933996 PRJNA274362_S_NODE_27331_length_181_cov_1.181818_g27211_i0 PRJNA274362 27331 181 1.181818 2.13909058 Chlamydomonadales 3042 Plants Plants 85.5 1.09e-17   NR GFR39621.1 47775 g27211 i0 63.3 4.97237569060773 60 22 99.4 0 1 180 145 204 GFR39621.1 hypothetical protein Agub_g85 [Astrephomene gubernaculifera] diamond 900 86.3 0.990730011587486 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
30281764 30281764 PRJNA274362_S_NODE_34392_length_166_cov_0.888889_g34272_i0 PRJNA274362 34392 166 0.888889 1.47555574 Eukaryota 2759 Plants Plants 94 7.189999999999999e-23   NR XP_011398510.1 3075 g34272 i0 70.4 15.7771084337349 54 16 97.6 0 166 5 64 117 XP_011398510.1 FK506-binding protein 2 [Auxenochlorella protothecoides] diamond 2619 94.4 0.995762711864407 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30881591 30881591 PRJNA274362_S_NODE_35894_length_164_cov_0.904348_g35774_i0 PRJNA274362 35894 164 0.904348 1.48313072 Eukaryota 2759 Plants Plants 84 4.42e-18   NR KAJ9523531.1 44745 g35774 i0 76.6 13.8475609756098 47 11 86 0 146 6 153 199 KAJ9523531.1 hypothetical protein QJQ45_007193 [Haematococcus lacustris] diamond 2271 84.7 0.991735537190083 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31260870 31260870 PRJNA274362_S_NODE_12975_length_247_cov_1.222222_g12855_i0 PRJNA274362 12975 247 1.222222 3.01888834 Eukaryota 2759 Plants Plants 114 4.39e-29   NR KAJ9522600.1 44745 g12855 i0 71.6 16.748987854251 74 21 89.9 0 5 226 155 228 KAJ9522600.1 hypothetical protein QJQ45_019660 [Haematococcus lacustris] diamond 4137 114 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31622616 31622616 PRJNA274362_S_NODE_26116_length_185_cov_0.977941_g25996_i0 PRJNA274362 26116 185 0.977941 1.80919085 Edaphochlamys debaryana 47281 Plants Plants 73.6 1.15e-13   NR KAG2489093.1 47281 g25996 i0 60 9.0972972972973 55 22 89.2 0 173 9 41 95 KAG2489093.1 hypothetical protein HYH03_012319 [Edaphochlamys debaryana] diamond 1683 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;