contig_metadata
8 rows where bioproject = "PRJNA274362", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5474199 | 5474199 | PRJNA274362_S_NODE_3585_length_437_cov_1.729381_g3465_i0 | PRJNA274362 | 3585 | 437 | 1.729381 | 7.55739497 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 403 | 1.0099999999999999e-107 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g3465 | i0 | 83.916 | 314.851258581236 | 429 | 61 | 97 | 8 | 14 | 437 | 27396 | 26971 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 137590 | 403 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 6748156 | 6748156 | PRJNA274362_S_NODE_1886_length_586_cov_1.897579_g1777_i0 | PRJNA274362 | 1886 | 586 | 1.897579 | 11.11981294 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 564 | 6.019999999999998e-156 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g1777 | i0 | 86.398 | 172.081911262799 | 522 | 64 | 89 | 7 | 68 | 586 | 16603 | 16086 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 100840 | 564 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 10574654 | 10574654 | PRJNA274362_S_NODE_27989_length_179_cov_1.200000_g27869_i0 | PRJNA274362 | 27989 | 179 | 1.2 | 2.148 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 243 | 8.379999999999999e-60 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g27869 | i0 | 91.16 | 13.0502793296089 | 181 | 13 | 100 | 3 | 1 | 179 | 1316260 | 1316439 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 2336 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14399727 | 14399727 | PRJNA274362_S_NODE_32192_length_169_cov_0.866667_g32072_i0 | PRJNA274362 | 32192 | 169 | 0.866667 | 1.46466723 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 250 | 4.66e-62 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g32072 | i0 | 93.491 | 240.692307692308 | 169 | 9 | 100 | 2 | 1 | 169 | 3831306 | 3831472 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 40677 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18221999 | 18221999 | PRJNA274362_S_NODE_11215_length_262_cov_2.835681_g11095_i0 | PRJNA274362 | 11215 | 262 | 2.835681 | 7.42948422 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 370 | 5.81e-98 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g11095 | i0 | 94.915 | 284.248091603053 | 236 | 12 | 90 | 0 | 1 | 236 | 17789 | 17554 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 74473 | 370 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 24010548 | 24010548 | PRJNA274362_S_NODE_3579_length_437_cov_2.131443_g3459_i0 | PRJNA274362 | 3579 | 437 | 2.131443 | 9.31440591 | Chthoniobacter | 295577 | Bacteria | Bacteria | 584 | 3.3699999999999986e-162 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g3459 | i0 | 91.055 | 150.398169336384 | 436 | 34 | 99 | 5 | 1 | 434 | 15614 | 16046 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 65724 | 584 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 28084674 | 28084674 | PRJNA274362_S_NODE_23285_length_194_cov_0.882759_g23165_i0 | PRJNA274362 | 23285 | 194 | 0.882759 | 1.71255246 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 45.8 | 0.00152 | NR | PYJ00909.1 | 2026799 | g23165 | i0 | 54.1 | 2.33505154639175 | 37 | 16 | 55.7 | 1 | 176 | 69 | 258 | 294 | PYJ00909.1 MAG: alpha/beta hydrolase [Verrucomicrobiota bacterium] | diamond | 453 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32540424 | 32540424 | PRJNA274362_S_NODE_23079_length_194_cov_1.765517_g22959_i0 | PRJNA274362 | 23079 | 194 | 1.765517 | 3.42510298 | Limisphaera ngatamarikiensis | 1324935 | Bacteria | Bacteria | 97.4 | 2.32e-22 | NR | WP_165108057.1 | 1324935 | g22959 | i0 | 74.6 | 3.92783505154639 | 63 | 16 | 97.4 | 0 | 192 | 4 | 12 | 74 | WP_165108057.1 malate dehydrogenase [Limisphaera ngatamarikiensis] | diamond | 762 | 97.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaeraceae | Limisphaera | Limisphaera ngatamarikiensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;