RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA274362", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA274362 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9298980 9298980 PRJNA274362_S_NODE_6208_length_340_cov_1.326460_g6088_i0 PRJNA274362 6208 340 1.32646 4.509964 Fibrobacterota bacterium 2052160 Bacteria Bacteria 496 1.23e-135   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g6088 i0 92.982 233.108823529412 342 20 100 3 1 340 2981749 2981410 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 79257 496 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
10574925 10574925 PRJNA274362_S_NODE_8009_length_302_cov_2.968379_g7889_i0 PRJNA274362 8009 302 2.968379 8.96450458 Fibrobacterota bacterium 2052160 Bacteria Bacteria 440 5.139999999999999e-119   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g7889 i0 93.046 256.884105960265 302 20 100 1 1 302 2981708 2982008 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 77579 440 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;