RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA274362", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA274362 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1645147 1645147 PRJNA274362_S_NODE_12762_length_248_cov_2.708543_g12642_i0 PRJNA274362 12762 248 2.708543 6.71718664 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 112 1.14e-27   NR XP_013760592.1 461836 g12642 i0 69.1 1.8508064516129 81 23 95.6 1 9 245 38 118 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 459 112 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
1645639 1645639 PRJNA274362_S_NODE_37742_length_162_cov_0.893805_g37622_i0 PRJNA274362 37742 162 0.893805 1.4479641 Thecamonas trahens 529818 Root_unresolved Root_unresolved 99 1.71e-16   NTclustered gi|923124497|ref|XM_013900263.1| 461836 g37622 i0 84.314 0.62962962962963 102 14 62 2 4 103 297 398 Thecamonas trahens ATCC 50062 30S ribosomal protein S10p/S20e (AMSG_07948), mRNA blastn 102 99 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
21460332 21460332 PRJNA274362_S_NODE_2377_length_527_cov_1.882845_g2260_i0 PRJNA274362 2377 527 1.882845 9.92259315 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 207 8.5e-63   NR XP_013760592.1 461836 g2260 i0 61.8 0.984819734345351 173 64 98.5 1 526 8 125 295 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 519 207 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29902323 29902323 PRJNA274362_S_NODE_34391_length_166_cov_0.888889_g34271_i0 PRJNA274362 34391 166 0.888889 1.47555574 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.4 1.1199999999999999e-23   NR XP_013753563.1 461836 g34271 i0 78.2 7.95180722891566 55 12 99.4 0 166 2 64 118 XP_013753563.1 uncharacterized protein AMSG_10397 [Thecamonas trahens ATCC 50062] diamond 1320 97.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;