RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJNA274362", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 27 ✖

tax_clade 1

  • Amoebozoa · 27 ✖

bioproject 1

  • PRJNA274362 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370615 370615 PRJNA274362_S_NODE_26541_length_183_cov_1.798507_g26421_i0 PRJNA274362 26541 183 1.798507 3.29126781 Dictyostelium purpureum 5786 Evosea other_Eukaryota 263 6.61e-66   NTclustered gi|330799499|ref|XM_003287734.1| 5786 g26421 i0 93.714 97.2677595628415 175 11 96 0 3 177 263 89 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72359), partial mRNA blastn 17800 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
370636 370636 PRJNA274362_S_NODE_2741_length_494_cov_3.323596_g2623_i0 PRJNA274362 2741 494 3.323596 16.41856424 Entamoeba suis 359305 Evosea other_Eukaryota 444 6.81e-120   NTclustered gi|731174162|dbj|AB914741.1| 359305 g2623 i0 83.368 98.9392712550607 487 74 98 7 1 484 243 725 Entamoeba suis gene for actin, partial cds, isolate: Sa-69 blastn 48876 444 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba suis
1645556 1645556 PRJNA274362_S_NODE_3302_length_453_cov_2.987624_g3182_i0 PRJNA274362 3302 453 2.987624 13.53393672 Dictyosteliales 2058949 Evosea other_Eukaryota 103 5.58e-26   NR XP_628995.1 352472 g3182 i0 64.5 1.00662251655629 76 27 50.3 0 31 258 1 76 XP_628995.1 40S ribosomal protein S21 [Dictyostelium discoideum AX4] diamond 456 103 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
4197583 4197583 PRJNA274362_S_NODE_19384_length_209_cov_0.943750_g19264_i0 PRJNA274362 19384 209 0.94375 1.9724375 Dictyostelium discoideum 44689 Evosea other_Eukaryota 250 6.05e-62   NTclustered gi|66805384|ref|XM_631333.1| 352472 g19264 i0 88.406 96.6172248803828 207 24 99 0 1 207 1119 913 Dictyostelium discoideum AX4 hypothetical protein (act4) mRNA, complete cds blastn 20193 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5473668 5473668 PRJNA274362_S_NODE_11605_length_258_cov_3.674641_g11485_i0 PRJNA274362 11605 258 3.674641 9.48057378 Dictyostelium discoideum 44689 Evosea other_Eukaryota 353 5.749999999999998e-93   NTclustered gi|66804710|ref|XM_630996.1| 352472 g11485 i0 91.732 96.7403100775194 254 21 98 0 3 256 652 905 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 24959 353 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6748081 6748081 PRJNA274362_S_NODE_15186_length_231_cov_1.142857_g15066_i0 PRJNA274362 15186 231 1.142857 2.63999967 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 134 2.7e-34   NR XP_004350624.1 261658 g15066 i0 82.9 12.8701298701299 76 13 98.7 0 4 231 345 420 XP_004350624.1 elongation factor 2 [Cavenderia fasciculata] diamond 2973 134 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
7436492 7436492 PRJNA274362_S_NODE_20606_length_204_cov_0.825806_g20486_i0 PRJNA274362 20606 204 0.825806 1.68464424 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 79.7 7.77e-16   NR KAH3732769.1 1580589 g20486 i0 65 0.882352941176471 60 19 85.3 1 196 23 101 160 KAH3732769.1 actin bundling protein [Pelomyxa schiedti] diamond 180 79.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
10574637 10574637 PRJNA274362_S_NODE_27329_length_181_cov_1.181818_g27209_i0 PRJNA274362 27329 181 1.181818 2.13909058 Diacheopsis resinae 3092648 Evosea other_Eukaryota 200 5.19e-47   NTclustered gi|2727873016|gb|OR778661.1| 3092648 g27209 i0 88.024 92.2375690607735 167 18 92 2 1 166 497 662 Diacheopsis sp. OShchepin-2023a voucher LK-zV4186 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 16695 200 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida   Diacheopsis Diacheopsis resinae
11261757 11261757 PRJNA274362_S_NODE_20949_length_202_cov_1.679739_g20829_i0 PRJNA274362 20949 202 1.679739 3.39307278 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 2.35e-26   NR XP_003293941.1 5786 g20829 i0 77.3 4.91584158415842 66 15 98 0 201 4 298 363 XP_003293941.1 S-adenosylmethionine synthetase [Dictyostelium purpureum] diamond 993 108 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
11849183 11849183 PRJNA274362_S_NODE_23030_length_194_cov_5.020690_g22910_i0 PRJNA274362 23030 194 5.02069 9.7401386 Diachea mitchellii 2928464 Evosea other_Eukaryota 254 4.28e-63   NTclustered gi|2574169345|gb|OP630987.1| 2928464 g22910 i0 90.256 98.2680412371134 195 17 100 2 1 194 875 682 Diachea mitchellii strain MA-Fungi 96407 alpha-tubulin (aTUB) gene, partial cds blastn 19064 254 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Diachea Diachea mitchellii
15086209 15086209 PRJNA274362_S_NODE_31172_length_171_cov_0.991803_g31052_i0 PRJNA274362 31172 171 0.991803 1.69598313 Didymium 5792 Evosea other_Eukaryota 174 2.93e-39   NTclustered gi|2049856602|gb|MG963730.1| 289976 g31052 i0 88.356 84.8479532163743 146 16 85 1 1 145 504 649 Didymium clavus strain MA-Fungi 51663 alpha-tubulin (a-Tub) gene, partial cds blastn 14509 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium clavus
18222412 18222412 PRJNA274362_S_NODE_31135_length_171_cov_1.122951_g31015_i0 PRJNA274362 31135 171 1.122951 1.92024621 Filamoeba nolandi 136452 Evosea other_Eukaryota 161 2.28e-35   NTclustered gi|146448849|gb|EF513192.1| 136452 g31015 i0 86 81.7426900584795 150 21 88 0 15 164 538 687 Filamoeba nolandi elongation factor 1A (EF1A) gene, partial cds blastn 13978 161 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
22047048 22047048 PRJNA274362_S_NODE_22558_length_196_cov_1.625850_g22438_i0 PRJNA274362 22558 196 1.62585 3.186666 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 1.22e-30   NR KAF2076787.1 133409 g22438 i0 83.1 5.96938775510204 65 11 99.5 0 2 196 37 101 KAF2076787.1 hypothetical protein CYY_001913 [Polysphondylium violaceum] diamond 1170 113 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
26630918 26630918 PRJNA274362_S_NODE_32621_length_168_cov_1.252101_g32501_i0 PRJNA274362 32621 168 1.252101 2.10352968 Physarum polycephalum 5791 Evosea other_Eukaryota 73.9 1.06e-13   NR AAD24195.1 5791 g32501 i0 68.1 1.80357142857143 47 15 83.9 0 145 5 140 186 AAD24195.1 fragmin A [Physarum polycephalum] diamond 303 73.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
26725468 26725468 PRJNA274362_S_NODE_34781_length_165_cov_1.344828_g34661_i0 PRJNA274362 34781 165 1.344828 2.2189662 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.5 7.4e-19   NR PRP80408.1 1890364 g34661 i0 75.9 0.981818181818182 54 13 98.2 0 164 3 93 146 PRP80408.1 40S ribosomal protein S9 [Planoprotostelium fungivorum] diamond 162 85.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27800741 27800741 PRJNA274362_S_NODE_16424_length_223_cov_1.839080_g16304_i0 PRJNA274362 16424 223 1.83908 4.1011484 Heterostelium album PN5 2086695 Evosea other_Eukaryota 64.3 1.52e-10   NR XP_020426699.1 670386 g16304 i0 37 2.97309417040359 73 46 98.2 0 5 223 26 98 XP_020426699.1 hypothetical protein PPL_00065 [Heterostelium album PN500] diamond 663 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28400522 28400522 PRJNA274362_S_NODE_33626_length_167_cov_0.881356_g33506_i0 PRJNA274362 33626 167 0.881356 1.47186452 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 47 4.26e-4   NR PRP79645.1 1890364 g33506 i0 40 0.988023952095808 55 31 95.2 1 165 7 518 572 PRP79645.1 hypothetical protein PROFUN_10545 [Planoprotostelium fungivorum] diamond 165 47 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29049820 29049820 PRJNA274362_S_NODE_20748_length_203_cov_1.350649_g20628_i0 PRJNA274362 20748 203 1.350649 2.74181747 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 3.39e-19   NR XP_003294985.1 5786 g20628 i0 68.3 5.76354679802956 63 20 93.1 0 2 190 36 98 XP_003294985.1 uncharacterized protein DICPUDRAFT_59352 [Dictyostelium purpureum] diamond 1170 84.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29505481 29505481 PRJNA274362_S_NODE_7010_length_322_cov_2.065934_g6890_i0 PRJNA274362 7010 322 2.065934 6.65230748 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 98.2 1.05e-24   NR XP_002649122.1 352472 g6890 i0 88.2 1.42546583850932 51 6 47.5 0 6 158 1 51 XP_002649122.1 60S ribosomal protein L39 [Dictyostelium discoideum AX4] diamond 459 98.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30073918 30073918 PRJNA274362_S_NODE_35112_length_165_cov_0.896552_g34992_i0 PRJNA274362 35112 165 0.896552 1.4793108 Dictyostelium purpureum 5786 Evosea other_Eukaryota 72.4 3.35e-13   NR XP_003284782.1 5786 g34992 i0 62.3 4.78181818181818 53 20 96.4 0 160 2 208 260 XP_003284782.1 uncharacterized protein DICPUDRAFT_28222 [Dictyostelium purpureum] diamond 789 72.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30091575 30091575 PRJNA274362_S_NODE_2892_length_483_cov_1.891705_g2773_i0 PRJNA274362 2892 483 1.891705 9.13693515 Entamoeba 5758 Evosea other_Eukaryota 152 2.470000000000001e-44   NR XP_004182885.1 370355 g2773 i0 50.4 1.70186335403727 137 68 85.1 0 470 60 2 138 XP_004182885.1 cofilin, putative [Entamoeba invadens IP1] diamond 822 152 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
30422002 30422002 PRJNA274362_S_NODE_5313_length_363_cov_1.821656_g5193_i0 PRJNA274362 5313 363 1.821656 6.61261128 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 92.8 1.63e-19   NR KYQ91790.1 361077 g5193 i0 45.8 2 120 59 99.2 2 2 361 169 282 KYQ91790.1 severin [Tieghemostelium lacteum] diamond 726 92.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30611054 30611054 PRJNA274362_S_NODE_19493_length_208_cov_1.603774_g19373_i0 PRJNA274362 19493 208 1.603774 3.33584992 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 91.3 1.51e-19   NR KAH3758099.1 1580589 g19373 i0 55.9 0.980769230769231 68 30 98.1 0 3 206 284 351 KAH3758099.1 actin binding protein [Pelomyxa schiedti] diamond 204 91.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30800628 30800628 PRJNA274362_S_NODE_2894_length_483_cov_1.529954_g2775_i0 PRJNA274362 2894 483 1.529954 7.38967782 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 45.4 0.0127   NR KAH3743981.1 1580589 g2775 i0 29 0.813664596273292 131 65 77.6 7 54 428 27 135 KAH3743981.1 hypothetical protein Pelo_14605 [Pelomyxa schiedti] diamond 393 45.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30832322 30832322 PRJNA274362_S_NODE_35874_length_164_cov_0.904348_g35754_i0 PRJNA274362 35874 164 0.904348 1.48313072 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.1 3.22e-13   NR PRP82899.1 1890364 g35754 i0 61.5 2.83536585365854 52 20 95.1 0 161 6 87 138 PRP82899.1 hypothetical protein PROFUN_06676 [Planoprotostelium fungivorum] diamond 465 70.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31179567 31179567 PRJNA274362_S_NODE_29375_length_175_cov_1.500000_g29255_i0 PRJNA274362 29375 175 1.5 2.625 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 63.9 8.53e-11   NR KAH3765825.1 1580589 g29255 i0 53.3 1.02857142857143 60 25 97.7 1 5 175 45 104 KAH3765825.1 translationally controlled tumor protein [Pelomyxa schiedti] diamond 180 63.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32508816 32508816 PRJNA274362_S_NODE_30479_length_172_cov_1.691057_g30359_i0 PRJNA274362 30479 172 1.691057 2.90861804 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 78.2 5.3e-16   NR XP_629876.1 352472 g30359 i0 64.3 2.8953488372093 56 20 97.7 0 170 3 43 98 XP_629876.1 S60 ribosomal protein L13 [Dictyostelium discoideum AX4] diamond 498 78.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;