RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA270367", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Nitrososphaerota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA270367 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29112928 29112928 PRJNA270367_P_NODE_2928_length_808_cov_2.793149_g2752_i0 PRJNA270367 2928 808 2.793149 22.56864392 Thermoproteati 1783275 Archaea Archaea 49.3 0.00861   NR MRN62000.1 2026768 g2752 i0 36.6 0.527227722772277 71 43 26.4 1 180 392 237 305 MRN62000.1 esterase [Nitrosopumilales archaeon] diamond 426 49.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;