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contig_metadata

13 rows where bioproject = "PRJNA270367" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA270367 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19496091 19496091 PRJNA270367_P_NODE_41616_length_167_cov_0.881356_g41411_i0 PRJNA270367 41616 167 0.881356 1.47186452 Gemmatimonas phototrophica 1379270 Bacteria Bacteria 187 3.68e-43   NTclustered gi|1015602748|gb|CP011454.1| 1379270 g41411 i0 88.387 0.92814371257485 155 18 93 0 7 161 3780447 3780293 Gemmatimonas phototrophica strain AP64, complete genome blastn 155 187 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas phototrophica
27200256 27200256 PRJNA270367_P_NODE_31842_length_196_cov_1.047619_g31637_i0 PRJNA270367 31842 196 1.047619 2.05333324 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 98.2 2.37e-22   NR HEU6453690.1 2026741 g31637 i0 59.4 6.76530612244898 64 26 98 0 3 194 315 378 HEU6453690.1 multicopper oxidase domain-containing protein [Gemmatimonadaceae bacterium] diamond 1326 98.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
27579512 27579512 PRJNA270367_P_NODE_43424_length_165_cov_0.896552_g43219_i0 PRJNA270367 43424 165 0.896552 1.4793108 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 47 3.52e-4   NR MBT6147915.1 2026742 g43219 i0 53.8 0.709090909090909 39 18 70.9 0 144 28 60 98 MBT6147915.1 hypothetical protein [Gemmatimonadota bacterium] diamond 117 47 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27642901 27642901 PRJNA270367_P_NODE_25004_length_230_cov_1.149171_g24799_i0 PRJNA270367 25004 230 1.149171 2.6430933 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 74.3 2.33e-13   NR MEO7999787.1 2026741 g24799 i0 57.4 1.65652173913043 61 26 79.6 0 185 3 290 350 MEO7999787.1 protein kinase [Gemmatimonadaceae bacterium] diamond 381 74.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
28400498 28400498 PRJNA270367_P_NODE_33586_length_189_cov_1.264286_g33381_i0 PRJNA270367 33586 189 1.264286 2.38950054 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 71.6 9.35e-13   NR HKV75498.1 2448054 g33381 i0 47.5 4.68253968253968 59 31 93.7 0 188 12 47 105 HKV75498.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Gemmatimonadales bacterium] diamond 885 71.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
29568665 29568665 PRJNA270367_P_NODE_46410_length_162_cov_0.920354_g46205_i0 PRJNA270367 46410 162 0.920354 1.49097348 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 46.2 7.56e-4   NR HEV2180266.1 2026741 g46205 i0 72.4 0.537037037037037 29 8 53.7 0 162 76 33 61 HEV2180266.1 multicopper oxidase domain-containing protein [Gemmatimonadaceae bacterium] diamond 87 46.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
29916268 29916268 PRJNA270367_P_NODE_43531_length_165_cov_0.896552_g43326_i0 PRJNA270367 43531 165 0.896552 1.4793108 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 50.8 1.81e-5   NR RMH69234.1 2026742 g43326 i0 53.7 0.745454545454545 41 17 70.9 1 117 1 42 82 RMH69234.1 MAG: lipase [Gemmatimonadota bacterium] diamond 123 50.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30611051 30611051 PRJNA270367_P_NODE_8933_length_448_cov_1.887218_g8734_i0 PRJNA270367 8933 448 1.887218 8.45473664 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 63.5 1.84e-8   NR MBM3956824.1 2026742 g8734 i0 32.7 1.00446428571429 150 75 99.1 6 1 444 87 212 MBM3956824.1 tandem-95 repeat protein [Gemmatimonadota bacterium] diamond 450 63.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32115051 32115051 PRJNA270367_P_NODE_3378_length_750_cov_2.092725_g3199_i0 PRJNA270367 3378 750 2.092725 15.6954375 Pseudomonadati 3379134 Bacteria Bacteria 218 3.98e-63   NR NNE08319.1 2026742 g3199 i0 42.7 2.84 239 126 95.2 5 2 715 103 331 NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] diamond 2130 219 0.995433789954338 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32223856 32223856 PRJNA270367_P_NODE_44718_length_164_cov_0.904348_g44513_i0 PRJNA270367 44718 164 0.904348 1.48313072 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 76.6 2.6e-15   NR HWP37596.1 2448054 g44513 i0 67.4 5.26829268292683 46 15 84.1 0 27 164 154 199 HWP37596.1 peptidylprolyl isomerase [Gemmatimonadales bacterium] diamond 864 76.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32287365 32287365 PRJNA270367_P_NODE_36679_length_178_cov_1.209302_g36474_i0 PRJNA270367 36679 178 1.209302 2.15255756 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 43.1 0.0112   NR HUC42016.1 2448054 g36474 i0 40 1.01123595505618 60 31 97.8 2 176 3 208 264 HUC42016.1 serine/threonine-protein kinase [Gemmatimonadales bacterium] diamond 180 43.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32318991 32318991 PRJNA270367_P_NODE_22699_length_246_cov_1.421320_g22494_i0 PRJNA270367 22699 246 1.42132 3.4964472 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 52 2.07e-5   NR MBA2292746.1 2448054 g22494 i0 56.4 0.670731707317073 55 23 67.1 1 9 173 516 569 MBA2292746.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Gemmatimonadales bacterium] diamond 165 52 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32350513 32350513 PRJNA270367_P_NODE_12819_length_366_cov_1.536278_g12617_i0 PRJNA270367 12819 366 1.536278 5.62277748 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 182 5.16e-52   NR MCC6317049.1 2026741 g12617 i0 68 18 122 39 100 0 366 1 240 361 MCC6317049.1 L-glutamate gamma-semialdehyde dehydrogenase [Gemmatimonadaceae bacterium] diamond 6588 182 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;