RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA270367" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA270367 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27105446 27105446 PRJNA270367_P_NODE_23822_length_238_cov_0.703704_g23617_i0 PRJNA270367 23822 238 0.703704 1.67481552 Fidelibacterota bacterium 2026760 Bacteria Bacteria 74.7 1.93e-15   NR HIB32922.1 2026760 g23617 i0 47.9 0.920168067226891 73 38 92 0 237 19 12 84 HIB32922.1 30S ribosomal protein S15 [Fidelibacterota bacterium] diamond 219 74.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28228506 28228506 PRJNA270367_P_NODE_5906_length_562_cov_1.438596_g5714_i0 PRJNA270367 5906 562 1.438596 8.08490952 Bacteria 2 Bacteria Bacteria 65.1 1.74e-8   NR MBF89995.1 2026760 g5714 i0 30.9 4.45729537366548 175 105 92.9 6 544 23 1559 1718 MBF89995.1 hypothetical protein [Fidelibacterota bacterium] diamond 2505 65.5 0.993893129770992 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28810579 28810579 PRJNA270367_P_NODE_39348_length_169_cov_1.300000_g39143_i0 PRJNA270367 39348 169 1.3 2.197 Fidelibacterota bacterium 2026760 Bacteria Bacteria 38.9 0.0462   NR MBC8312453.1 2026760 g39143 i0 53.6 0.497041420118343 28 13 49.7 0 51 134 1 28 MBC8312453.1 SelT/SelW/SelH family protein [Fidelibacterota bacterium] diamond 84 38.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32603301 32603301 PRJNA270367_P_NODE_45660_length_163_cov_0.912281_g45455_i0 PRJNA270367 45660 163 0.912281 1.48701803 Fidelibacterota bacterium 2026760 Bacteria Bacteria 70.5 2.09e-12   NR MAV93055.1 2026760 g45455 i0 56.6 0.975460122699387 53 23 97.5 0 163 5 257 309 MAV93055.1 penicillin amidase [Fidelibacterota bacterium] diamond 159 70.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32603304 32603304 PRJNA270367_P_NODE_8560_length_458_cov_2.530562_g8361_i0 PRJNA270367 8560 458 2.530562 11.58997396 Fidelibacterota bacterium 2026760 Bacteria Bacteria 80.9 6.52e-15   NR MBT6945793.1 2026760 g8361 i0 36.8 1.63755458515284 125 65 80.6 4 41 409 86 198 MBT6945793.1 hypothetical protein [Fidelibacterota bacterium] diamond 750 80.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;