RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA270367" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA270367 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29252712 29252712 PRJNA270367_P_NODE_11929_length_381_cov_2.198795_g11727_i0 PRJNA270367 11929 381 2.198795 8.37740895 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 162 2.03e-45   NR MCC5878147.1 2715255 g11727 i0 65.9 2.97637795275591 126 42 99.2 1 379 2 160 284 MCC5878147.1 phosphoribosyl-ATP diphosphatase [Candidatus Sumerlaeia bacterium] diamond 1134 162 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
29916266 29916266 PRJNA270367_P_NODE_40351_length_168_cov_1.277311_g40146_i0 PRJNA270367 40351 168 1.277311 2.14588248 candidate division BRC1 bacterium HGW-BRC1-1 2013722 Bacteria Bacteria 83.2 7.58e-17   NR PKO14406.1 2013722 g40146 i0 71.4 1 56 16 100 0 168 1 432 487 PKO14406.1 MAG: phosphoenolpyruvate carboxykinase (ATP) [candidate division BRC1 bacterium HGW-BRC1-1] diamond 168 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         candidate division BRC1 bacterium HGW-BRC1-1
31274713 31274713 PRJNA270367_P_NODE_39555_length_169_cov_0.866667_g39350_i0 PRJNA270367 39555 169 0.866667 1.46466723 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 55.1 6.11e-7   NR HPS01743.1 2107588 g39350 i0 47.8 0.816568047337278 46 24 81.7 0 2 139 275 320 HPS01743.1 serine protease [Candidatus Sumerlaeota bacterium] diamond 138 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;