RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA270367" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA270367 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2920788 2920788 PRJNA270367_P_NODE_40503_length_168_cov_0.873950_g40298_i0 PRJNA270367 40503 168 0.87395 1.468236 Candidatus Nanosynbacter featherlites 2572088 Bacteria Bacteria 233 4.7e-57   NTclustered gi|1663054866|gb|CP040004.1| 2572088 g40298 i0 91.667 2.01190476190476 168 14 100 0 1 168 457834 457667 Candidatus Nanosynbacter featherlites strain BB001 chromosome, complete genome blastn 338 233 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter featherlites
8710949 8710949 PRJNA270367_P_NODE_39707_length_169_cov_0.866667_g39502_i0 PRJNA270367 39707 169 0.866667 1.46466723 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 95.5 1.54e-21   NR RKW00374.1 1917697 g39502 i0 97.8 0.816568047337278 46 1 81.7 0 167 30 28 73 RKW00374.1 MAG: ABC transporter ATP-binding protein [Candidatus Saccharimonas sp.] diamond 138 95.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
9298179 9298179 PRJNA270367_P_NODE_40648_length_168_cov_0.873950_g40443_i0 PRJNA270367 40648 168 0.87395 1.468236 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 305 9.81e-79   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g40443 i0 99.405 3 168 1 100 0 1 168 828688 828521 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 504 305 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB
16947500 16947500 PRJNA270367_P_NODE_39934_length_169_cov_0.866667_g39729_i0 PRJNA270367 39934 169 0.866667 1.46466723 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 296 5.9e-76   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g39729 i0 98.225 1 169 3 100 0 1 169 13785 13953 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 169 296 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB
29207737 29207737 PRJNA270367_P_NODE_42449_length_166_cov_0.888889_g42244_i0 PRJNA270367 42449 166 0.888889 1.47555574 Bacillati 1783272 Bacteria Bacteria 73.9 1.32e-13   NR PID31882.1 2026720 g42244 i0 65.3 2.74698795180723 49 17 88.6 0 1 147 1000 1048 PID31882.1 MAG: hypothetical protein CR970_03330 [Candidatus Saccharibacteria bacterium] diamond 456 73.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29852993 29852993 PRJNA270367_P_NODE_45291_length_163_cov_0.912281_g45086_i0 PRJNA270367 45291 163 0.912281 1.48701803 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 43.9 0.00509   NR PID31711.1 2026720 g45086 i0 38.5 1.61963190184049 52 31 95.7 1 159 4 55 105 PID31711.1 MAG: hypothetical protein CR970_04335 [Candidatus Saccharibacteria bacterium] diamond 264 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31418947 31418947 PRJNA270367_P_NODE_45796_length_163_cov_0.912281_g45591_i0 PRJNA270367 45796 163 0.912281 1.48701803 Candidatus Saccharimonas 1331051 Bacteria Bacteria 99 4.669999999999999e-23   NR RKW02284.1 1917697 g45591 i0 96.3 1.98773006134969 54 2 99.4 0 2 163 173 226 RKW02284.1 MAG: tryptophan--tRNA ligase [Candidatus Saccharimonas sp.] diamond 324 99 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;